Protein

View in Explore
Genbank accession
QAU04713.1 [GenBank]
Protein name
receptor binding protein
RBP type
TSP
Evidence DepoScope
Probability 0,93
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MSFFAGKFSDGKTVLSLNAANGGDINQHYSPNTNSIFHSDMPFVLVDGTYEAALGDAGNGYFVTQMPWDIINIKSNDPGRVILTAIEINGTHRGFLNGTQSQVGQMLNFFEDQPRAGAELALTSAFAIGDSLAHGTYTYNGSLGHEESIARQGTGGTLLQSSGFQIYRPGGVSAGEAIARAWALIGFPSGVSVPPLDAANTDYWDPNWQAPIGSAGRGHDHFYVCNSNIRGFVGKKGEIPSNVNINYQSPSFPTKVYVCRGSTTNMAAQATRKVYVQDWYNVTPTKVIWYVLNLRYSNGNMGVSGNPFTGSDILISPSNFTIKGVSLPNTGYKFINQNAFGNLGYRPDMEYVGNNAAYTGVFGDNTARCEFIGSSNGGLWSPINYGGAASQISLYKFGVGKQWYVDTNTNSIGNEHGPVWSPSTVPLRLFPSNVVSTYVGDDLNPSYPAAGDYYQPLATVWLGLPNTNSTIILTTEVIMGNINTAGQRVSTYSGQAWRVQGRRQQSYTAGDGIFHQILTLPPGYLVPYHSTTSYSYTQTWASRPDEMAFRRNGYIYTVKNLGNGNVELGVIIHAAEAAAIFLPRLRVTVQRLT
Physico‐chemical
properties
protein length:593 AA
molecular weight: 64277,88750 Da
isoelectric point:6,83207
aromaticity:0,11973
hydropathy:-0,22985

Domains

Domains [InterPro]
IPR059609
RBD
1–593
IPR059609
QAU04713.1
1 593
Architecture
RBD
RBD 1-593
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QAU04713.1
1 593
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,5883
Central domain 11 233 224 0,9165
C-terminal 234 593 359 0,8184
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-233
C-terminal
234-593

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage 3-29
[NCBI] 		2508069 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus ev329
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QAU04713.1 [NCBI]
Genbank nucleotide accession
MK393882 [NCBI]
CDS location
range 95847 -> 97628
strand -
CDS
ATGAGTTTTTTCGCAGGAAAATTTAGTGATGGTAAAACTGTATTATCTCTAAACGCTGCTAATGGTGGTGATATAAATCAGCACTACTCTCCAAATACTAATAGTATCTTCCACTCAGATATGCCATTTGTCCTAGTTGATGGGACTTACGAGGCTGCTCTAGGTGATGCAGGTAATGGGTATTTTGTTACTCAGATGCCTTGGGATATTATAAACATTAAATCCAATGATCCTGGTAGAGTTATACTAACTGCTATTGAGATAAACGGTACTCATAGAGGATTCCTCAATGGTACTCAATCTCAGGTTGGCCAGATGCTAAACTTTTTTGAAGATCAACCACGTGCTGGCGCTGAGTTAGCTCTAACTTCTGCTTTTGCAATCGGTGATAGTCTAGCTCATGGTACTTATACGTATAATGGTAGTCTTGGTCATGAGGAATCTATTGCTCGGCAAGGAACTGGAGGTACTTTACTACAGTCTTCCGGTTTCCAGATCTATAGACCTGGTGGTGTTTCTGCTGGTGAAGCCATTGCCAGAGCCTGGGCTCTGATTGGGTTTCCTTCAGGAGTTTCAGTACCTCCACTAGATGCAGCAAATACAGATTATTGGGATCCTAACTGGCAGGCGCCTATTGGATCTGCTGGCAGAGGGCATGATCATTTTTATGTATGTAACTCTAATATACGTGGATTTGTAGGTAAAAAAGGGGAGATACCTTCTAATGTAAACATTAACTACCAATCCCCTTCCTTTCCTACTAAAGTATACGTTTGTAGGGGTTCTACGACTAATATGGCTGCGCAAGCCACTAGAAAGGTATATGTACAGGACTGGTATAACGTTACTCCTACTAAGGTTATTTGGTATGTGCTAAATCTGCGCTATTCTAATGGTAATATGGGAGTTTCTGGTAATCCATTTACTGGTTCTGATATCCTTATTTCTCCCTCTAATTTTACTATTAAAGGGGTTAGTTTACCAAATACAGGATATAAATTCATTAACCAGAATGCCTTTGGAAACTTAGGCTATCGCCCTGATATGGAGTATGTTGGTAATAATGCTGCATATACTGGAGTTTTTGGTGATAATACTGCACGATGTGAATTTATAGGCTCCAGTAATGGTGGATTGTGGTCACCCATTAACTATGGAGGTGCAGCTTCCCAAATTAGCCTTTATAAATTTGGTGTAGGTAAACAGTGGTATGTAGATACTAATACTAACTCCATTGGTAATGAACATGGACCTGTATGGAGTCCTAGTACAGTACCTTTAAGGTTATTCCCTAGCAATGTTGTCAGTACTTATGTTGGGGATGACCTCAATCCATCTTATCCTGCAGCAGGTGATTACTACCAGCCTTTAGCAACAGTCTGGTTAGGACTGCCTAACACCAACTCTACTATCATATTAACTACCGAAGTTATTATGGGCAACATTAACACTGCGGGACAACGTGTTAGTACATACAGTGGGCAGGCCTGGCGTGTACAAGGTAGACGCCAACAGAGTTACACTGCGGGGGATGGTATATTTCACCAAATCCTTACCCTACCACCTGGCTATCTAGTACCATATCACAGTACAACTTCCTATAGTTACACACAAACTTGGGCTAGTAGACCTGATGAGATGGCTTTTCGTAGAAATGGGTATATTTATACAGTAAAAAACCTTGGTAACGGTAACGTTGAATTAGGAGTTATTATCCATGCTGCCGAAGCAGCTGCTATCTTCTTACCAAGACTACGTGTAACAGTTCAACGCCTAACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e312639041fc4f2e3d905928b1b3ba9cc1fb4982e687257f578e8824c44af746
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2505
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50