Protein

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Genbank accession
XPN57824.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,59
Protein sequence
MAVAGPWIGTSALAQTGDHWMAGAAARLRMGVPFWMSNMIGRSVEIIHTLGADHNFNGQWFRDRCFEAGSAPIVFNITGDLVSYSKDVPLFFMYGDTPNEYVQLNIHGVTMYGRGGNGGSNSPGSAGGHCIQNDIGGRLRINNGGAIAAGGGGGGGGYYSPFSQMRLTFGGGGGRPFGAPGGSIDMQSGATAGTLYAPGSGSVNGIYNGGSGGEVGAAGGRCNIRGQGSEYNGGDSGYAVIGSSPTWQNVGAIYGPRV
Physico‐chemical
properties
protein length:258 AA
molecular weight: 26175,69550 Da
isoelectric point:6,95166
aromaticity:0,10078
hydropathy:-0,16124

Domains

Domains [InterPro]
IPR048291
ATT
1–40
IPR048291 IPR007932
DC_2135
STR
1–138
DC_2135
XPN57824.1
1 258
Architecture
ATT
STR
RBD
ATT 1-40 | STR 41-138 | RBD 139-258
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPN57824.1
1 258
Domain Start End Length (AA) Confidence
N-terminal 1 14 14 0,4922
Central domain 15 219 206 0,9689
C-terminal 220 258 38 0,3876
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-14
Central
15-219
C-terminal
220-258

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_Maryam
[NCBI] 		3390826 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPN57824.1 [NCBI]
Genbank nucleotide accession
PQ799574.1 [NCBI]
CDS location
range 82942 -> 83718
strand -
CDS
ATGGCAGTAGCAGGACCGTGGATAGGAACTTCTGCATTGGCACAGACTGGAGACCATTGGATGGCAGGAGCAGCCGCAAGATTAAGAATGGGCGTTCCGTTTTGGATGAGTAATATGATAGGTCGATCTGTTGAAATAATTCACACGCTTGGAGCAGACCATAACTTCAATGGTCAATGGTTCCGAGATAGATGTTTTGAGGCAGGTAGTGCACCTATAGTGTTTAATATTACAGGTGATTTAGTATCATATTCTAAAGATGTTCCTTTATTCTTTATGTACGGAGATACACCAAATGAATATGTTCAGTTAAATATACACGGCGTAACGATGTATGGTCGTGGAGGTAATGGCGGTAGCAATAGTCCTGGCTCAGCTGGAGGTCATTGTATTCAAAACGATATTGGTGGGAGACTAAGAATTAATAATGGCGGAGCTATTGCTGCCGGTGGTGGCGGTGGTGGCGGTGGGTATTATTCTCCTTTTTCACAAATGAGATTAACCTTTGGTGGTGGTGGTGGGCGTCCGTTTGGTGCACCTGGCGGATCTATTGATATGCAATCAGGCGCAACTGCTGGTACTCTTTATGCGCCTGGATCGGGGTCCGTGAACGGTATCTATAATGGCGGAAGCGGTGGTGAGGTAGGCGCCGCAGGAGGTAGATGTAATATTCGTGGTCAAGGATCTGAATACAATGGCGGCGATTCTGGATATGCTGTTATAGGGTCTTCTCCAACGTGGCAAAATGTTGGAGCAATATATGGTCCAAGAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7838be21c7fbb2cea00b28c99b48f1fb15ab903a2e3377b417c11a6c741cb1af
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8799
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50