Protein

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Genbank accession
APD20940.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MADRIVRSLRQVETIDRLADFLTEENDLISTSDGHIYVRTDTGYYKLTFYNDLKTLINKYSGQIENHDIAINDNKEKISTFLEKIKKFQPMIDSNKKEIDSLKEKDVILNESLEQHQTQLNEFEKSMLQYDDKYETLTQSLNATKDSVGRNTDDINLIKANTGAENIDALKRELAEVKKSFNIDKIKDIESQIELLKSKQNNDKTIQVIQEDINKLKQNSSAGKLESLEQTINDIKANANLDKIKELETKLNSINQKEYTQDINSIKSEIATLKTNNDKISKIEKDIQELKDRPVVDGNGHIDLSKYDNDISDLKQKTSTNESSISGLSTKVDNLNIDTKIAQSKSEIEQNFDQKINSAKLQFNDTGWQDITLESGIIASDSNGGYPAPQYRIVTINGVKTIQLKGVLKGIKKNGDIKLGTINANLKSTHHYTQCAIDNKMMNTRLYLNFNNELHFVTSNYSDSDLTNGDKRFAIDTQIIE
Physico‐chemical
properties
protein length:481 AA
molecular weight: 54664,48010 Da
isoelectric point:5,32953
aromaticity:0,05405
hydropathy:-0,77443

Domains

Domains [InterPro]
Coil
113–133
Coil Coil Coil Coil
APD20940.1
1 481
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage SCH1
[NCBI] 		1913581 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APD20940.1 [NCBI]
Genbank nucleotide accession
KY000084.1 [NCBI]
CDS location
range 9941 -> 11386
strand -
CDS
ATGGCTGATAGAATCGTAAGAAGTTTAAGACAAGTTGAAACAATAGACAGGTTAGCAGATTTTTTAACAGAAGAAAATGACTTAATCAGTACATCAGACGGACATATTTATGTCCGTACTGATACTGGTTATTATAAGTTAACATTTTATAATGATTTAAAAACATTGATTAATAAATACAGTGGTCAAATAGAAAATCATGATATTGCAATTAATGATAACAAAGAAAAAATATCAACATTTCTAGAGAAAATAAAAAAATTCCAACCAATGATTGATAGTAATAAAAAAGAGATTGATTCATTAAAAGAAAAAGATGTCATATTAAATGAAAGTTTAGAACAACATCAAACACAATTAAATGAATTTGAAAAATCAATGTTACAGTATGATGATAAATATGAAACACTTACACAATCGTTAAACGCTACTAAAGATAGTGTAGGACGTAACACAGATGACATTAATTTAATTAAAGCAAATACTGGCGCTGAAAACATTGACGCATTAAAAAGAGAATTAGCTGAAGTTAAAAAAAGTTTTAATATTGATAAAATAAAAGACATTGAAAGTCAAATCGAATTATTAAAATCTAAACAAAACAACGACAAAACAATTCAAGTAATACAAGAGGATATTAATAAGTTAAAACAAAATTCAAGTGCTGGGAAACTTGAAAGTTTAGAACAAACCATTAATGACATCAAAGCAAATGCAAACCTTGATAAGATAAAAGAGTTAGAAACAAAATTAAACAGTATTAACCAAAAAGAGTATACACAGGATATTAATTCAATTAAATCTGAAATCGCTACTTTAAAAACAAATAATGATAAAATATCAAAAATTGAAAAAGATATTCAAGAATTAAAAGATAGACCAGTTGTTGACGGAAACGGTCATATTGATTTATCTAAATATGATAATGATATTAGTGATTTAAAACAAAAAACATCAACAAACGAATCAAGTATAAGCGGTTTATCAACAAAAGTGGATAACTTAAATATAGATACTAAAATTGCACAATCTAAATCAGAAATTGAACAAAATTTTGATCAAAAAATTAACAGTGCAAAATTACAATTTAATGATACAGGTTGGCAAGATATAACATTAGAAAGTGGTATTATTGCAAGTGATAGCAATGGTGGATATCCCGCACCGCAATATCGTATTGTCACAATTAATGGTGTTAAAACGATACAATTAAAAGGAGTATTAAAAGGGATTAAGAAAAACGGTGATATTAAATTAGGTACGATTAACGCAAACTTAAAATCAACACATCACTACACACAATGTGCGATTGATAATAAAATGATGAATACAAGATTATATTTAAACTTTAATAATGAATTACATTTTGTTACATCAAATTATAGCGATAGTGACTTAACAAATGGTGATAAACGTTTTGCAATAGATACACAAATCATTGAATAA

Tertiary structure

PDB ID
a8e710ea7a715a22f47e7a06b54ae5173ce3d2f3419e6bbdbccaf5f4370c3e3e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7161
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Antibacterial composition for prophylaxis and treatment of hospital infections (variants), strains of bacteriophages, used for obtaining thereof Aleshkin,A.V., Volozhantsev,N.V., Verevkin,V.V., Krasilnikova,V.M., Myakinina,V.P., Popova,A.V. and Svetoch,E.A. 2016-10 — GenBank