Protein

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Genbank accession
YP_010114205.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MSNILDSAKQHLSNTENLKLAHLVSLELPGEEGVFVYFTDYFRSITFKGHKYETGVVKRIGDVKQTKDFSIYRVPVQVSGAIEEEINRVLNSKSFLNRKIKILRAFLDEDGQVIPIYSNGDTITYFEGIIVTSKLDETNTSSGTGRSTITWNCANKNYELDAVNGRITDDESHRGLINVGGTMQPSGSAKKPEYQLDRGFFHAGKSVKLLAEYQTKEKRFRLKKRRAGGFRGLMGQKHYDMEEYWADVVREVDMDINLTAKYLPVLYGVQKVSGIPIFFDTDIGNPEEVWAVYAFCEGEIDGFLDIFFGDNPMICVSENDQEKRACVGMKRNNGDTIGALAPKSGRTAPSNHGEHYIYNDGDGPIEFWTFHGSSTQDAAKILVDKAAAGEFKLQSDGSYGSEYWDDTFKLLDTAYVVVKYTLNENRTSIPEVSAEIQGKKIPVYHEDGTSTSDKTSLNLAWQALDYLRSTTYGAGLTLDEIDLPAIQECAKIMDDIDNSYEPAWVPYWRYLGWEDYKAENRQILQGSGLLSTSDTVFKNIQALIGQFDASLNIVSGKYTLTMEANRPPIYDIDEGDIINGSIQVSDNSMDQKYNAVQASIMDPSKGWGTNTITFFNKDYKLEDNGKDRKANISFPFITNYYTARTRAEYYLRRSRYNRTVSFELPFTFMWLYPNANITLTKKRYNWDKKTFMIQDMTWMANGHIKVVAREYDETMFLSSGQVDNSNNQIPDVVVNVLPPRDLKYEPKVGDNKVGLNGTLSWFPSLSKRVAYYTIKYTGLTDLITIPAPGNIAPAQRIELPLYNLAEGEYTFEVRAVSFDGETSMPISITEKINPSAILPMIENFVIVNRAVVSGNVFVGKDLQLAWDELIEGRSVDGFKYHLRFISGDTGDTLRDVTTTSTTFTYTLAMNKGDFKLLHGTLGIHRNMTVYIRGEGYNNITSINWTVL
Physico‐chemical
properties
protein length:947 AA
molecular weight: 106916,12620 Da
isoelectric point:5,34164
aromaticity:0,11299
hydropathy:-0,39968

Domains

Domains [InterPro]
DC_0187
STR
242–939
DC_0187
IPR032876
ATT
539–693
IPR032876 IPR003961
YP_010114205.1
1 947
Architecture
STR
ATT
STR
STR 242-538 | ATT 539-693 | STR 694-939 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010114205.1
1 947
Domain Start End Length (AA) Confidence
N-terminal 1 306 306 0,9198
Central domain 307 522 217 0,4587
C-terminal 523 947 424 0,0487
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-306
Central
307-522
C-terminal
523-947

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Gary
[NCBI] 		2801534 Uroviricota > Caudoviricetes > Demerecviridae > Thalassavirus > Thalassavirus gary
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010114205.1 [NCBI]
Genbank nucleotide accession
NC_055913.1 [NCBI]
CDS location
range 25872 -> 28715
strand +
CDS
ATGAGTAACATACTAGATTCAGCAAAACAACATCTAAGTAATACAGAAAACCTTAAATTGGCTCATCTAGTTTCTTTGGAGTTACCTGGTGAGGAAGGTGTTTTTGTATACTTTACTGACTACTTTAGAAGCATCACTTTCAAAGGTCATAAATACGAAACTGGTGTAGTTAAGCGCATAGGTGACGTAAAGCAAACAAAAGACTTCAGCATTTATAGAGTACCTGTACAAGTTAGTGGGGCTATAGAAGAAGAGATAAATAGAGTTCTTAATTCTAAAAGTTTCTTAAATAGAAAAATAAAGATTCTTAGAGCATTCCTAGATGAGGATGGTCAAGTGATCCCTATCTACTCTAATGGGGATACAATTACATACTTTGAAGGTATTATAGTAACCAGCAAGTTAGATGAGACTAATACTAGTTCTGGTACTGGGCGATCTACTATTACATGGAACTGTGCGAACAAGAACTATGAACTAGACGCTGTAAATGGTCGTATAACGGATGATGAGTCTCATCGTGGCCTTATCAATGTAGGCGGTACTATGCAGCCTTCTGGTTCTGCTAAAAAACCAGAATATCAATTAGATCGTGGTTTCTTCCATGCAGGTAAGTCTGTAAAACTACTTGCTGAATACCAGACAAAGGAAAAACGTTTTAGATTGAAAAAACGTAGAGCAGGCGGATTCAGGGGGTTGATGGGTCAGAAGCACTACGACATGGAAGAATACTGGGCAGACGTTGTAAGGGAAGTAGATATGGATATAAACCTTACAGCAAAATACTTGCCAGTACTTTATGGTGTTCAGAAAGTATCAGGTATTCCTATCTTCTTTGACACAGATATTGGTAATCCTGAGGAAGTGTGGGCTGTATATGCTTTCTGTGAAGGAGAAATTGATGGTTTTCTTGATATATTCTTTGGTGACAATCCTATGATCTGTGTATCAGAGAATGATCAAGAGAAACGTGCCTGTGTAGGTATGAAAAGAAATAATGGTGATACTATAGGAGCACTAGCACCTAAAAGTGGAAGAACAGCCCCAAGTAACCACGGAGAACACTATATCTACAATGATGGAGACGGCCCTATAGAGTTCTGGACGTTCCACGGATCAAGTACACAAGATGCTGCCAAGATTCTTGTCGATAAAGCGGCTGCTGGTGAATTTAAGCTACAGAGTGATGGTAGCTACGGTTCAGAATATTGGGACGATACATTCAAGTTACTAGACACAGCATACGTTGTTGTTAAGTATACTCTAAATGAAAACAGAACAAGTATTCCAGAAGTTTCAGCAGAAATACAGGGTAAGAAAATCCCAGTATACCACGAAGACGGAACATCCACTAGCGATAAGACCTCACTTAACCTAGCATGGCAAGCACTAGACTATCTAAGAAGTACAACTTATGGGGCGGGCCTTACTCTAGATGAGATAGATTTACCAGCCATTCAAGAATGTGCTAAGATAATGGATGACATTGATAACTCTTACGAGCCAGCTTGGGTTCCTTACTGGAGATACCTTGGATGGGAGGATTATAAGGCTGAGAATAGACAGATACTACAGGGATCGGGGCTACTATCTACTAGTGATACGGTATTTAAAAATATTCAGGCTTTAATAGGGCAGTTCGATGCCTCATTGAATATAGTTAGTGGTAAATATACTCTTACTATGGAAGCTAATCGTCCCCCTATCTATGATATAGATGAGGGTGATATTATAAATGGAAGCATTCAAGTATCAGATAATTCCATGGATCAAAAATATAATGCTGTTCAGGCCAGTATCATGGACCCATCTAAAGGTTGGGGTACTAATACCATTACGTTCTTCAATAAGGACTATAAACTAGAAGATAACGGTAAAGATAGGAAAGCTAATATATCTTTCCCATTTATTACTAACTACTATACAGCTAGAACCCGTGCAGAATACTACTTACGAAGATCTAGATATAATAGAACTGTGTCTTTCGAGCTACCTTTTACATTTATGTGGTTGTACCCAAATGCCAATATAACTCTTACTAAGAAGCGTTATAATTGGGATAAGAAGACATTCATGATACAGGATATGACATGGATGGCCAATGGCCACATCAAAGTAGTAGCAAGAGAATACGATGAAACAATGTTCTTAAGCTCTGGACAAGTAGATAATAGTAATAATCAGATACCTGATGTAGTTGTGAATGTACTACCCCCTAGAGATCTTAAGTATGAACCTAAGGTAGGGGATAATAAAGTGGGCCTTAATGGTACATTATCTTGGTTTCCTAGCTTGTCTAAACGAGTAGCGTACTACACTATTAAGTATACTGGACTTACGGATCTTATCACTATCCCTGCTCCAGGTAACATAGCTCCAGCGCAGAGAATAGAGTTACCACTATATAATTTAGCAGAAGGTGAGTATACTTTTGAAGTGCGTGCGGTGTCATTCGATGGTGAAACAAGTATGCCTATAAGTATTACAGAGAAAATAAACCCTAGTGCGATACTGCCTATGATTGAAAATTTCGTTATAGTAAATCGAGCAGTAGTATCTGGTAACGTATTCGTAGGTAAAGACTTACAGTTAGCATGGGATGAGTTAATTGAGGGTAGGTCAGTAGACGGCTTCAAGTACCACTTGAGATTTATCTCTGGTGATACCGGAGACACACTAAGAGATGTTACTACAACAAGCACCACTTTCACATACACCCTAGCGATGAATAAGGGAGACTTCAAACTCTTACATGGTACTCTAGGTATACACAGAAATATGACGGTGTATATTAGAGGTGAGGGTTATAACAATATAACTTCAATTAATTGGACGGTATTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
8419070e12ba876ff4923cec3d04830d84241b42e4418f7bae9608f45689d2d3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8178
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50