Protein

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Genbank accession
AHX01176.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSFNIGVNLDKYKEIKISTVNSLRDSKLLTFTYNDVEFQTRPEDRENILGQALEISLGSDEDVSWIAADNSVITFAPEEFVTFAKEVAEHKRECIFKGRMMKDAILAAISKEEVDNISWPE
Physico‐chemical
properties
protein length:121 AA
molecular weight: 13793,39740 Da
isoelectric point:4,62711
aromaticity:0,09091
hydropathy:-0,31653

Domains

Domains [InterPro]
DC_2197
STR
4–121
DC_2197
IPR025484
STR
13–115
IPR025484
AHX01176.1
1 121
Architecture
STR
STR 4-121
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Nitrincola phage 1M3-16
[NCBI] 		1472912 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Nitrincola
[NCBI] 		267849 Bacteria > Proteobacteria > Gammaproteobacteria > Oceanospirillales > Oceanospirillaceae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHX01176.1 [NCBI]
Genbank nucleotide accession
KJ534580.1 [NCBI]
CDS location
range 55256 -> 55621
strand -
CDS
ATGAGTTTTAATATAGGTGTAAACCTTGACAAGTATAAAGAGATTAAAATATCTACTGTAAATAGTCTACGTGACTCCAAACTGCTCACCTTCACCTACAATGATGTAGAATTCCAAACTCGTCCAGAAGATCGTGAAAATATATTAGGGCAAGCCTTGGAAATATCACTGGGTTCAGATGAAGATGTTAGTTGGATTGCTGCTGATAATTCTGTAATAACATTCGCTCCAGAAGAATTTGTCACCTTCGCTAAAGAGGTTGCAGAACATAAGCGTGAATGTATATTCAAAGGTAGAATGATGAAGGATGCTATTCTTGCCGCCATCTCTAAAGAAGAGGTGGACAATATAAGCTGGCCTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3950da6c78ba25d0b99b522b5b6da4cc395b99aed7ad12284c13a339f8f75e50
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9494
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of a Haloalkaliphilic Bacteriophage, Isolated from Lake Magadi in Kenya's Great Rift Valley Movassaghi,M., Lobo,N., Moulton,K.D., Mwaura,F., Rothschild,L.J. and Duboise,S.M. 2011-07 — GenBank