Protein

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Genbank accession
AGY46491.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MPTSNKIVTVSGTGYTVDVTVCNLDADLTLKDFVVLHDGVLVSNTNYTKTTRTILTYTGTALATTTVEVRRRTPTSYILGARYGSRIRSDDWNKELDRITRRAEEYELNGVGAGSITGSQAPQNDPFGASWASDIVYPPTRQAVYSWGVNLVNATQLSSTLSSYVTNTALSTLLTNYALSASPSFTGNPTVPTQLTTDSSTRIANTAFVQNLIAGLNLPTTYAPLSSPTFTGTPSAPTPAAGNSTTRLATTAFVSQSQRPFVDATRNTTPQTLAHNTYTTLVWNNEISDTDGAYSSTTGAFTVPAGLGGYYEFTGAVLLSADCNNLIVEIYVNGASARRIGQSQAGSDVLFGTPFTGSVLLGAGDVVTLRCYQFNGSSASRDTLVTSGAFNWVTIKRLNV
Physico‐chemical
properties
protein length:400 AA
molecular weight: 42478,63990 Da
isoelectric point:6,13863
aromaticity:0,08750
hydropathy:-0,09850

Domains

Domains [InterPro]
Coil
89–109
Coil IPR008983
IPR008983
269–388
IPR008983
AGY46491.1
1 400
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage PP
[NCBI] 		434346 Viruses > Caudovirales > Podoviridae >
Host Leptolyngbya boryana
[NCBI] 		1184 Bacteria > Cyanobacteria > Oscillatoriophycideae > Oscillatoriales > Leptolyngbya >
Host Leptolyngbya foveolarum
[NCBI] 		47253 Bacteria > Cyanobacteria > Oscillatoriophycideae > Oscillatoriales > Leptolyngbya >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGY46491.1 [NCBI]
Genbank nucleotide accession
KF598865.1 [NCBI]
CDS location
range 15551 -> 16753
strand -
CDS
ATGCCAACGAGTAACAAGATAGTTACCGTCAGTGGTACAGGTTACACAGTAGACGTGACAGTGTGTAACCTAGATGCTGACCTAACACTAAAAGACTTCGTAGTACTCCATGACGGGGTACTTGTGAGTAACACTAACTATACTAAGACAACTAGAACCATCTTGACCTATACGGGTACAGCGTTAGCTACGACTACCGTAGAGGTTAGACGAAGAACACCGACGAGTTACATACTAGGTGCAAGGTATGGTAGTCGTATCCGTAGTGATGACTGGAACAAAGAGTTAGACCGTATCACTAGACGTGCTGAAGAGTACGAGCTTAACGGTGTAGGGGCTGGTAGTATCACTGGTAGCCAAGCACCACAAAACGACCCCTTTGGTGCGTCATGGGCTAGTGATATCGTTTACCCTCCGACAAGACAAGCTGTATACAGTTGGGGTGTGAACCTCGTTAACGCAACACAGTTATCTTCTACGTTGTCGTCATACGTGACAAACACAGCACTATCTACGTTGTTAACTAACTATGCGTTATCTGCTTCGCCTTCCTTTACGGGGAACCCAACAGTACCTACACAGTTAACGACAGATAGTAGTACACGTATCGCTAACACAGCGTTTGTTCAGAACCTTATCGCAGGGTTAAACTTACCGACAACGTATGCACCACTGTCTAGTCCTACGTTCACAGGTACACCATCTGCGCCTACGCCTGCTGCTGGTAACTCTACAACTAGGTTAGCTACTACAGCCTTTGTGTCTCAAAGCCAAAGACCGTTTGTAGATGCTACACGTAACACAACACCACAAACGCTTGCTCATAACACATACACTACACTTGTATGGAACAACGAGATCAGTGACACTGACGGTGCGTATAGCTCGACTACAGGTGCGTTTACTGTACCTGCTGGTTTGGGTGGTTACTATGAGTTCACTGGTGCTGTGTTGTTAAGTGCTGACTGTAACAACCTTATCGTAGAGATCTATGTGAACGGTGCATCAGCTAGACGTATAGGACAAAGCCAAGCAGGTAGTGATGTCTTGTTCGGTACGCCCTTCACTGGTAGTGTGTTGCTAGGTGCTGGTGATGTGGTGACACTGAGATGCTATCAGTTCAACGGTTCATCAGCATCTCGTGATACGTTGGTCACAAGCGGAGCGTTCAACTGGGTGACTATCAAACGCCTGAACGTATAA

Tertiary structure

PDB ID
83b519fdb42b86156591cf5ffbae42fb282ac21dade1c53d845ef2baae2d13c9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8144
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and genomic analysis of a plaque purified strain of cyanophage PP Zhou,Y., Lin,J., Li,N., Hu,Z. and Deng,F. 2013 24132757 GenBank