Protein

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Genbank accession
AMW62423.1 [GenBank]
Protein name
polygalacturonase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MIYVKDFSGITEAVKIQNAINAAALPTSSSKTVMLEEKDYYLESSLTLLNDVELLFGYRSRLVIGGNFPVLLIGRNASVTNPFIAIDAPTFDSPVFYLDGKNKYYNTWNKTAIKDGVVLNWTGSHKGVGIRFYSGGTDHEISFVDTSNIKLVGLRKGIELEAKAPSTGMAWVNANRFNNISIEDCVEMITIDSSETIPNECSGNIFSGLQLQPSTATTKVLKVSGQHNRFDGMLWDISLIPTSKFVDITANNSYTKIDFNRSLPSTKVQDNGASTILL
Physico‐chemical
properties
protein length:278 AA
molecular weight: 30528,29220 Da
isoelectric point:5,67790
aromaticity:0,09353
hydropathy:-0,07914

Domains

Domains [InterPro]
IPR011050
15–210
IPR011050
AMW62423.1
1 278
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage Zuko
[NCBI] 		1805956 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AMW62423.1 [NCBI]
Genbank nucleotide accession
KU737348 [NCBI]
CDS location
range 34110 -> 34946
strand +
CDS
ATGATATATGTGAAGGATTTTAGTGGGATTACCGAGGCTGTCAAGATACAGAATGCTATCAATGCAGCAGCTTTACCAACTTCTTCATCAAAGACCGTAATGCTAGAAGAGAAAGATTATTACCTAGAGTCATCTCTTACTTTGTTAAATGATGTAGAATTACTGTTCGGCTATCGCTCAAGATTAGTTATTGGTGGTAATTTCCCAGTCCTATTAATAGGGCGTAATGCTTCTGTTACAAATCCATTCATAGCTATCGATGCTCCAACTTTCGATTCACCTGTCTTTTATCTAGATGGTAAAAATAAATATTACAATACATGGAATAAGACAGCGATAAAAGATGGAGTAGTTCTCAACTGGACAGGTTCTCATAAAGGTGTAGGTATCCGATTCTACTCTGGAGGAACTGACCATGAGATTTCATTTGTAGATACATCGAATATCAAACTAGTAGGTTTAAGAAAAGGTATAGAACTAGAAGCTAAGGCTCCATCTACTGGAATGGCATGGGTGAACGCTAACCGATTCAATAACATCTCTATAGAAGACTGTGTAGAAATGATTACGATTGACAGTAGCGAAACAATACCGAACGAATGTAGCGGTAACATCTTCTCAGGTTTGCAACTACAACCATCTACTGCAACTACAAAAGTCTTAAAGGTAAGTGGACAACATAACCGATTCGATGGTATGCTCTGGGATATATCTTTAATACCTACATCTAAGTTTGTAGATATTACAGCGAACAACTCCTACACAAAAATAGACTTCAATCGTTCATTACCTAGTACGAAAGTACAAGATAATGGAGCAAGCACAATTCTACTGTAG

Tertiary structure

PDB ID
e29bc207e7bdc1ef0f300ef0d98827e964a2cfc284e5ecbdc2b3320079075078
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9203
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50