Protein

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Genbank accession
YP_010108548.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MGFGPAYGTGRGGGAVDIFTKKDGNPAIFANTGARDTYFTTNPDELAKVKSSGNAVAIGTTNQITAAYVYKGNAWQAIATNFKGDKGAPGAPGDGIDYSHLEDNQLPKWDSKAKRFVSSGILSQEDGDIRMSPNSLTFGHHKMSSAIADVTFTNLGTNENYSFVYQTMNPGDKDAYIREIDSNIEEIIRVPVGTDDVVNPSNTVTVDADEIFLGGTFILSQDTQDVLMEVYNFNDPTQLIWRDNLGDMPSGENTVKFDTPFKCRAGFKYIIHLLSNAGDLVAKGSGNSFSWKINRAKMYIKKIASQDWVNEQPFIDDVTLTGNMFTFTLANGATKSVTLPPATGGVASPYDFTSFNSDKIPVLSEVANSTPVYNFNGLADSTFTLPSTDILPPNKNIALLIRNASPNNSSISVVSSGTDFIDRANIRTLNIPQGMLAMFISDYTRDLWHMVPIDSAGSGQNLDTNQIVKSVQPTASGTGLVTTYYDDSSITTTFDPWVSDINKLNDAVDTLQKQLKSKTRYYVYKGSNTPPPDIPTGARGGYYFTFTGTSADVVLSAPSRTAAISDGTILFVDNNSTSYKVTVTTTGSDTIAGTTKVDLPAESAAWYVRNGNNWQELYSGYLPASHKKLIDEIKTLISASNTFMRDVGVQGDDPNAGKVECTELEFHKCKVTQDTTIPTKGIVKFEGTTFVNPDGSEITTDKIKLVGMELVDPLDGTPPKLLLHGSGNLPTPHPTSGYGFFSDSATAPDTINLNSLPVFRNGRVSVHKDTADPQYAYILLPPGEGADADRIGELGGLPSYWAKSEKIYNIGGVSRTYTVFRSPYPFREQDLTLVIYH
Physico‐chemical
properties
protein length:837 AA
molecular weight: 90688,04200 Da
isoelectric point:4,97133
aromaticity:0,09677
hydropathy:-0,32234

Domains

Domains [InterPro]
DC_1058
STR
25–825
DC_1058
Coil
Unmapped
501–521
Coil
YP_010108548.1
1 837
Architecture
STR
STR 25-825 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010108548.1
1 837
Domain Start End Length (AA) Confidence
N-terminal 1 206 206 0,9807
Central domain 207 405 200 0,0639
C-terminal 406 837 431 0,1442
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-206
Central
207-405
C-terminal
406-837

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Quinn
[NCBI] 		2736265 Uroviricota > Caudoviricetes > Demerecviridae > Thalassavirus > Thalassavirus quinn
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010108548.1 [NCBI]
Genbank nucleotide accession
NC_055850.1 [NCBI]
CDS location
range 87173 -> 89686
strand +
CDS
ATGGGATTTGGCCCAGCCTATGGTACTGGTAGGGGCGGTGGAGCAGTAGACATCTTTACTAAAAAAGATGGAAACCCTGCCATTTTCGCCAATACTGGTGCTAGAGACACATACTTTACAACAAACCCTGATGAATTAGCTAAAGTAAAATCATCAGGTAATGCAGTAGCAATAGGTACTACTAACCAAATAACAGCTGCCTACGTATATAAAGGTAACGCATGGCAAGCAATCGCAACTAACTTCAAAGGTGACAAAGGTGCACCTGGAGCACCTGGTGATGGTATTGACTACAGCCACCTAGAGGACAATCAATTACCTAAGTGGGATTCAAAAGCTAAAAGGTTTGTTAGCTCAGGCATACTTTCACAAGAAGATGGTGATATAAGAATGTCACCTAACTCCTTAACCTTTGGACACCACAAAATGTCCTCTGCGATAGCTGATGTTACATTCACTAACCTAGGCACAAACGAAAACTACTCGTTTGTTTATCAGACAATGAATCCTGGTGATAAGGATGCCTACATACGTGAAATAGATAGTAATATAGAAGAGATTATAAGGGTGCCTGTAGGTACAGATGATGTTGTGAACCCTTCAAATACTGTTACAGTAGACGCCGATGAAATATTCTTAGGTGGTACTTTTATACTGTCTCAAGATACACAAGATGTTTTAATGGAGGTATATAATTTTAACGACCCTACCCAACTTATTTGGAGAGATAACTTAGGCGATATGCCTTCAGGAGAAAATACAGTTAAATTCGATACACCATTTAAATGTAGGGCAGGATTCAAGTATATTATACACCTATTAAGTAATGCAGGGGACTTAGTAGCAAAAGGTTCGGGAAACTCTTTCAGTTGGAAAATTAACCGTGCGAAAATGTACATTAAAAAGATTGCTTCCCAAGATTGGGTGAATGAGCAGCCATTTATTGATGATGTTACTTTAACCGGTAACATGTTTACATTTACTCTGGCTAATGGAGCAACTAAATCCGTTACTTTACCTCCAGCTACAGGTGGAGTCGCATCACCTTACGACTTTACTAGCTTTAATTCTGACAAAATTCCTGTTCTATCAGAGGTTGCGAATAGTACTCCAGTATACAACTTTAATGGTCTAGCAGATTCTACCTTTACGTTACCATCTACGGACATTTTACCGCCTAATAAAAACATCGCCCTACTAATTAGAAATGCAAGCCCTAATAATTCTTCCATAAGCGTAGTGTCTAGCGGGACTGATTTTATAGATAGAGCAAACATTCGTACACTAAATATACCGCAAGGTATGTTAGCCATGTTTATAAGTGATTATACTAGAGACCTATGGCACATGGTACCTATTGATTCAGCTGGTAGTGGACAGAATCTAGATACTAATCAAATAGTTAAGAGCGTACAACCAACAGCCAGTGGTACTGGTCTAGTTACTACATACTATGACGACTCAAGTATAACTACCACATTTGATCCTTGGGTTTCAGATATTAATAAACTTAACGACGCTGTAGATACGCTACAAAAACAACTTAAATCTAAGACTAGATACTATGTGTATAAGGGAAGTAACACGCCACCGCCAGATATCCCAACTGGAGCTAGGGGCGGGTACTACTTTACCTTTACAGGTACCTCAGCTGATGTGGTATTATCTGCACCAAGCAGAACAGCAGCTATATCTGATGGTACAATCCTGTTTGTTGATAACAATAGTACAAGCTATAAAGTGACTGTAACAACCACTGGATCAGATACTATTGCTGGTACTACTAAGGTAGACCTACCAGCTGAATCAGCAGCTTGGTATGTTCGTAACGGTAATAACTGGCAAGAATTATATTCTGGTTACTTACCAGCCTCGCATAAGAAGCTGATAGATGAGATTAAAACTCTAATCTCAGCAAGTAATACATTCATGCGAGATGTTGGTGTACAGGGCGATGATCCTAACGCTGGTAAAGTAGAGTGTACAGAGCTAGAGTTCCATAAGTGTAAGGTAACTCAGGATACTACAATACCTACTAAAGGTATTGTTAAGTTTGAAGGTACTACGTTTGTAAACCCAGACGGTTCAGAAATAACTACTGATAAAATCAAGCTAGTAGGTATGGAATTAGTGGATCCATTAGACGGAACTCCACCTAAACTATTACTACATGGCAGCGGTAACTTACCTACACCACACCCAACTAGCGGTTATGGTTTCTTTAGTGATTCTGCTACTGCTCCTGATACTATTAACTTAAATAGTCTTCCAGTGTTTAGGAATGGTAGAGTAAGCGTCCATAAAGACACCGCGGATCCACAATATGCATATATCTTACTACCACCAGGTGAAGGTGCTGACGCTGATCGAATTGGTGAGCTAGGTGGACTTCCTTCTTACTGGGCTAAGAGTGAGAAAATCTATAATATTGGTGGCGTATCAAGAACATATACAGTGTTCCGTTCTCCTTATCCATTCAGGGAACAGGACTTAACATTAGTAATATATCATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ebb60fb1bbdf54aad287c7938da76b64208dadc037b38167908538476c9a125c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5813
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50