Protein

View in Explore
Genbank accession
WNO29284.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,53
Protein sequence
MALISQSIKNLKGGISQQPDILRYSDQGSKQINGFSSEVEGLQKRPPSVHVKRLTDQFGLGQKPYCHIINRDEVERYAVFFTGSNIRVFDLFTGDEKTVNAPNGLSYVTSSNPRKDLRMVTVADYTFILNRNVSTAQGTTNTPRGLAPFGHFGLVVIRGGQYGRTYRVKVNGSVEASFETPLGDRVEHAKQIDIAYIIDQLAARLINRGWAVTKGSGYFYFSKSGSVIIKSLEVEDGYNGQLAWGIINDVQKTTQLPVYAPNNYIIRVSGDPTLNQDDYYVKFDASRNVWTECPAPNIKADYNKATMPHVLIREADGTFTFKQADWTHRAAGDDDTNPYPSFIGNSINDIFFFRNRLGFLSGENVILSGSGNYFNFFPESVAVLTDTDPIDVAVSTNRISILKYAVPFSEELILWSDQAQFVLSSDGGLTPTTVRLDLTTEFEVTEQARPFGIGRGVYFVSPRAKFSSVRRFYAVQDVTQVKNAEDISAHVPSYVENGVFKMSGSSTENFLTILTEGNEQRVYFYKFLYLQEQLVQQSWSHWDFGVNCRVLYCDMIGSVMHLVIDSPSGVLMEKIEFTQNTKDYPDEPYRLYVDRKIEYTFPEGSYNDDDFKTRVKLKDIYGSTPANGQYVFISLGGVTFTFDPPAGGWQANDGLIEFDGDLRGIKFFVGEAYTFLYEFSKFLIKTTDTAGGVATEDIGRLQLRRAWVNYDKSGNFRVEVNNQGRTFTYNMTGNRLSTNELILGDESLDTGQFRYAVSGNATQVTVSLISDTPNPLSIIGVGWEGYYVRRSSGI
Physico‐chemical
properties
protein length:794 AA
molecular weight: 89029,63300 Da
isoelectric point:5,41041
aromaticity:0,12594
hydropathy:-0,30630

Domains

Domains [InterPro]
IPR058003
TTP
1–794
IPR058003
WNO29284.1
1 794
Architecture
TTP
TTP 1-794
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNO29284.1
1 794
Domain Start End Length (AA) Confidence
N-terminal 1 149 149 0,9925
Central domain 150 348 200 0,0726
C-terminal 349 794 445 0,1507
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-149
Central
150-348
C-terminal
349-794

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 4141
[NCBI] 		3075081 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Chatterjeevirus
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNO29284.1 [NCBI]
Genbank nucleotide accession
OR233736 [NCBI]
CDS location
range 35294 -> 37678
strand +
CDS
ATGGCTCTTATCAGTCAAAGCATTAAGAACCTTAAAGGAGGTATCAGTCAACAACCTGATATCTTACGGTATTCCGACCAAGGTTCTAAACAGATTAATGGTTTCTCTTCAGAGGTAGAAGGTCTTCAAAAGAGACCTCCCTCAGTTCACGTAAAGAGATTAACCGACCAGTTTGGCTTAGGGCAAAAGCCTTATTGTCATATCATTAACCGTGATGAAGTAGAGCGTTATGCAGTGTTCTTTACAGGTTCAAACATTCGGGTATTCGATTTGTTTACTGGTGATGAGAAGACTGTGAATGCTCCTAACGGTTTATCTTACGTGACGTCTTCTAACCCTCGTAAAGACCTTCGTATGGTGACTGTTGCTGATTATACGTTCATTCTTAATCGTAACGTATCGACTGCTCAAGGGACAACTAACACTCCAAGGGGACTGGCTCCTTTTGGTCACTTTGGGTTGGTGGTTATCCGTGGTGGTCAATATGGTCGTACCTATCGAGTCAAAGTTAATGGAAGCGTAGAGGCATCCTTTGAGACTCCTTTAGGCGACCGAGTGGAACATGCAAAACAAATAGACATTGCGTATATCATTGACCAGTTAGCGGCACGTTTAATCAACAGGGGATGGGCTGTAACTAAAGGTTCCGGTTATTTCTATTTCTCAAAGAGTGGTTCCGTTATTATCAAATCTCTGGAAGTAGAGGATGGCTACAACGGGCAGTTGGCTTGGGGTATCATTAACGATGTTCAGAAGACAACTCAGTTACCTGTCTATGCGCCTAACAACTACATTATCCGAGTGTCTGGAGACCCTACGTTGAATCAGGATGATTACTACGTTAAGTTCGATGCTTCTCGTAACGTCTGGACTGAGTGCCCTGCTCCTAATATCAAAGCGGATTATAACAAGGCTACCATGCCTCATGTGTTGATTCGTGAAGCTGACGGTACGTTTACCTTCAAGCAAGCTGATTGGACTCACAGAGCTGCTGGTGATGACGATACGAACCCTTATCCGTCCTTCATTGGGAATAGTATTAACGATATCTTCTTCTTCCGTAACCGTTTAGGTTTCTTGAGTGGAGAGAACGTAATCCTTTCAGGTTCCGGTAATTACTTCAACTTCTTCCCTGAGTCAGTCGCGGTGTTAACCGATACAGACCCAATCGACGTAGCTGTAAGTACAAACAGAATCTCAATCCTGAAGTATGCTGTGCCATTCTCAGAAGAGTTAATCCTGTGGTCTGACCAAGCTCAGTTCGTATTAAGTTCTGATGGTGGTCTTACACCAACAACTGTACGATTAGACTTGACGACTGAATTTGAAGTGACTGAACAGGCTCGTCCTTTCGGTATTGGACGTGGTGTGTACTTCGTGTCACCTCGTGCTAAGTTCAGCTCTGTACGTCGATTCTATGCGGTTCAGGACGTTACCCAAGTGAAGAACGCAGAGGATATTTCAGCACACGTTCCTTCTTATGTTGAGAATGGTGTCTTCAAAATGTCCGGTAGTTCCACTGAGAACTTCTTAACGATTCTGACTGAAGGTAATGAACAACGAGTTTACTTCTACAAGTTCCTCTATCTGCAAGAACAGTTAGTTCAACAATCATGGTCTCATTGGGACTTTGGTGTGAACTGTCGAGTTCTGTATTGTGATATGATTGGTTCTGTGATGCATCTCGTTATTGACAGTCCGTCAGGTGTTCTTATGGAGAAGATTGAGTTCACTCAGAATACGAAAGACTATCCAGATGAGCCTTATCGTCTGTACGTTGACCGTAAGATTGAATACACGTTCCCTGAAGGTTCATACAATGATGATGACTTTAAGACTCGTGTTAAGCTCAAGGATATCTATGGCTCCACTCCTGCAAATGGACAATACGTGTTTATCTCACTTGGTGGTGTTACTTTCACGTTTGACCCTCCTGCTGGTGGTTGGCAAGCTAATGATGGTCTGATAGAGTTTGATGGTGATTTACGTGGTATTAAGTTCTTCGTTGGAGAAGCTTACACGTTCCTCTATGAGTTCTCGAAGTTCCTCATTAAGACAACCGATACGGCTGGTGGTGTGGCCACTGAAGATATCGGTAGGTTGCAACTTCGTCGTGCTTGGGTGAACTACGATAAGTCAGGTAACTTCCGAGTCGAAGTGAACAACCAAGGTCGAACCTTCACGTATAACATGACAGGGAACCGTTTGTCTACCAATGAGCTTATCCTTGGTGATGAATCTCTGGATACAGGTCAGTTCCGTTATGCGGTGTCTGGTAATGCAACTCAAGTAACTGTAAGTCTCATCTCAGATACTCCTAACCCATTATCCATCATCGGTGTAGGCTGGGAAGGATACTATGTGAGACGTTCATCTGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
98812c069c427711b24edc4b2c3ff296af47599adda78954925718ea6cab8510
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3119
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50