Protein

View in Explore

Genbank accession

QXO10811.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect

Probability 0,88

Evidence RBPdetect2

Probability 0,95

Protein sequence

MATNTTPISLLPQGNTTLTGTEVVPVVQSGQTVQLPLSVMKGPKGDQGDAGAKGDTGLKGDKGDKGDKGDTGEQGIQGLKGDKGDTGEAGTNGTNGKDGTNIRLLGTKPSIDDLPTVDNLPGDTWFVGGAGYTWSVDEAMWKTIGSFVGQDGVSVSIIGMFADVSALPPAGSNLNALAMVGSHLYGSDGSQWVDLGDLRGPQGAGLTPKGELASIDLLPEPSDENVSWIYVIAYHMHVSDGSAWIDMGDFRGPQGEKGDTGNTGPKGDQGEQGIKGDTGAKGDQGIQGLKGDTGTKGDKGDKGDQGERGLGIQIIDHLDSVDQLPDAADYGNGDTFVIDGHYHTVSNGQWVDLGDMTGPRGYSNYDLWLKEGNEGTVDDFLKSQKGADGIGLQIRGSFPSTANLPTEGMVNGDAYIIQQQMYVWDGTQWSIVGQVGPKGDKGDKGDKGDTGSKGDKGDQGIQGEQGIQGIQGTVGPKGEKGDMGPGITILGKLDSESELPASAELGQGYLIAGDFWGWDGDSFENMGPIQGPKGEQGEQGVKGDTGAKGDKGDTGAKGDQGIQGVKGDTGAKGDTGDTGASLIPKGPIANAAALPAAAPENAGWMYVTIDDKHSHVSDGTDWVDYGDFSGARGVDGIKGDTGAKGDTGAKGDKGDTGPGVIAKGQVANFAALPAPATANAGWYYTLADTKHSWISDGAAWVDLGDMSGAQGVKGDTGAKGDKGDMGAGLVPKGTVASSSALPAAATGNTGWIYVASDTMHSHVSNGTAWLDLGSLQGPKGDTGSKGDTGAKGDKGDTGAKGDTGSTGLQGLQGEQGEQGVKGDSVSFKGHVDADGDLPSTGQLVGDTWAVGTNLKSWNGASWEDLGDFAGPIGPQGEKGDIGAGIKILGKKASQGDLPASADAVGDGYMIGSNFWVWDGTAFVDVGVIQGPKGDQGIRGLTGAKGEQGEKGLKGDKGDAGPKWIVLSGVPNTAVGVIGDFYLRTDNLDYFQKTDTTTWSLLGKLGGGNVYDAEFDGKRKVRKDGTWIDLVFDFDRYDLKLVQPTGTDLDFALGNGFKLSATTTKALTIKNLPAATRIATIVIVLEGKGGNITFTNAISWSRGEAPTLGDTRTIIALLWDGANLTGQVAMTV

Physico‐chemical properties

protein length:	1131 AA
molecular weight:	115693,82080 Da
isoelectric point:	4,50372
aromaticity:	0,06454
hydropathy:	-0,46348

Domains

Domains [InterPro]

DC_1266
STR
2–197

DC_1266 DC_1065 DC_1065 IPR008160 DC_1340 IPR008160

IPR050149
Unmapped
40–962

IPR050149

IPR008160
STR
42–99

IPR008160 IPR008160 IPR008160 DC_1340 DC_1340

DC_1340
STR
278–379

DC_1340 DC_1340 DC_0114

QXO10811.1

1 1131

Architecture

STR

RBD

STR 2-197 | STR 199-823 | RBD 824-1131

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1266	STR	DC_1266	2	197	Novel HMM	DC_1266	Central	Low	Positional only	66 proteins / 66 hits
IPR050149	Unmapped	-	40	962	InterPro	Collagen superfamily	-	-	-	-
IPR008160	STR	DC_0536	42	99	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_1065	STR	DC_1065	199	300	Novel HMM	DC_1065	Central	Low	Positional only	109 proteins / 109 hits
IPR008160	STR	DC_0536	252	307	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_1340	STR	DC_1340	278	379	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
DC_1065	STR	DC_1065	364	480	Novel HMM	DC_1065	Central	Low	Positional only	109 proteins / 109 hits
IPR008160	STR	DC_0536	433	484	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_1340	STR	DC_1340	455	560	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
IPR008160	STR	DC_0536	530	580	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_1340	STR	DC_1340	551	648	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
DC_1340	STR	DC_1340	628	718	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
DC_1340	STR	DC_1340	706	807	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
IPR008160	STR	DC_0536	776	823	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_0114	RBD	DC_0114	801	1131	Novel HMM	DC_0114	C-terminal	Low	Positional only	42 proteins / 42 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Erwinia phage pEa_SNUABM_48 [NCBI]	2859283	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Erwinia amylovora [NCBI]	552	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

QXO10811.1 [NCBI]

Genbank nucleotide accession

MW879340.1 [NCBI]

CDS location

range 277235 -> 280630
strand -

CDS

ATGGCGACGAATACTACTCCGATTAGTCTACTGCCGCAGGGCAACACGACCTTAACCGGTACTGAGGTTGTCCCTGTCGTTCAGTCTGGTCAAACTGTACAACTGCCGCTCTCTGTGATGAAAGGCCCGAAAGGCGATCAAGGGGATGCGGGTGCCAAAGGCGACACTGGTCTCAAAGGAGACAAGGGCGATAAAGGCGATAAAGGTGATACCGGGGAACAAGGTATCCAAGGTCTCAAAGGAGACAAAGGTGACACCGGCGAAGCGGGCACCAACGGCACCAACGGTAAAGACGGCACCAACATCCGTCTGCTGGGCACCAAGCCGTCTATCGACGACCTGCCAACTGTAGACAACCTGCCAGGTGATACCTGGTTCGTAGGTGGCGCAGGTTACACCTGGTCCGTTGACGAAGCCATGTGGAAAACCATTGGTTCCTTCGTGGGTCAGGACGGTGTGTCCGTTTCTATCATTGGCATGTTTGCTGATGTGTCTGCTCTGCCGCCGGCAGGTAGCAACCTCAACGCACTGGCGATGGTTGGTTCACACCTGTACGGCTCCGATGGTTCACAGTGGGTTGACCTCGGTGACCTGCGTGGCCCTCAAGGCGCGGGTCTGACGCCGAAAGGTGAACTGGCCTCCATCGATCTGCTGCCAGAGCCTTCTGACGAGAACGTGTCCTGGATCTACGTGATCGCTTACCACATGCATGTTTCTGACGGTTCTGCATGGATCGACATGGGCGACTTCCGTGGCCCGCAGGGTGAGAAGGGCGATACTGGTAACACCGGTCCTAAAGGGGATCAAGGTGAGCAAGGTATCAAAGGTGATACTGGTGCCAAAGGCGACCAGGGCATCCAAGGCCTGAAGGGTGATACTGGGACCAAGGGTGATAAAGGTGATAAGGGTGACCAGGGTGAACGTGGCCTGGGTATTCAGATCATCGATCATCTTGATTCTGTTGATCAGCTGCCTGACGCTGCCGACTACGGCAACGGTGACACCTTTGTTATCGATGGCCACTACCACACCGTGTCTAACGGTCAGTGGGTAGACCTCGGTGACATGACCGGCCCACGCGGCTACTCCAACTACGACCTGTGGCTGAAAGAAGGTAACGAAGGTACCGTTGATGACTTCCTGAAGTCTCAGAAAGGTGCTGACGGTATCGGTCTGCAAATCCGTGGTTCTTTCCCATCCACTGCGAACCTGCCTACTGAAGGTATGGTGAACGGCGATGCGTACATCATTCAACAGCAGATGTATGTGTGGGACGGTACTCAGTGGTCCATCGTTGGCCAGGTCGGTCCTAAAGGTGACAAGGGCGATAAGGGCGATAAGGGTGACACCGGTTCCAAAGGGGACAAAGGTGATCAGGGTATTCAGGGTGAACAAGGTATTCAGGGTATCCAAGGTACCGTGGGTCCTAAAGGTGAGAAAGGGGACATGGGCCCTGGCATCACTATCCTGGGTAAACTGGACTCTGAATCTGAACTGCCTGCTTCTGCTGAGCTCGGTCAGGGTTATCTGATTGCGGGTGACTTCTGGGGTTGGGATGGCGACTCCTTCGAGAACATGGGTCCTATCCAGGGTCCGAAGGGTGAGCAAGGTGAGCAGGGCGTCAAGGGTGATACCGGCGCCAAAGGTGACAAGGGCGACACTGGTGCTAAAGGTGACCAGGGTATTCAGGGCGTTAAAGGCGACACTGGTGCGAAGGGCGATACCGGTGATACTGGTGCAAGCCTGATCCCTAAAGGTCCGATCGCTAACGCCGCTGCATTGCCAGCTGCCGCACCTGAGAACGCGGGTTGGATGTACGTCACTATCGACGACAAACATTCCCACGTGTCCGACGGTACCGACTGGGTCGACTACGGTGACTTCTCTGGTGCACGTGGTGTTGACGGCATCAAAGGTGACACCGGGGCCAAGGGTGATACCGGTGCGAAGGGCGATAAAGGTGACACTGGTCCTGGCGTGATTGCCAAAGGTCAGGTTGCGAACTTCGCGGCGCTGCCTGCTCCAGCTACGGCTAACGCTGGTTGGTACTACACGCTGGCCGACACCAAACACTCCTGGATCTCTGACGGTGCTGCTTGGGTTGATCTCGGCGACATGTCCGGTGCTCAGGGTGTGAAAGGTGATACCGGCGCCAAAGGCGACAAAGGCGACATGGGTGCAGGTCTGGTACCGAAAGGCACCGTGGCTTCTTCCTCCGCTCTGCCTGCTGCCGCAACCGGTAATACCGGCTGGATCTACGTTGCATCCGACACCATGCACTCTCATGTGTCTAATGGTACGGCGTGGCTGGATCTGGGTAGTCTGCAAGGTCCGAAGGGTGACACTGGTTCGAAGGGTGATACCGGAGCTAAAGGTGATAAAGGTGATACCGGTGCGAAGGGTGACACTGGTTCAACTGGTCTCCAGGGTCTGCAAGGTGAGCAGGGCGAGCAGGGCGTTAAAGGCGATAGCGTTTCCTTCAAAGGTCACGTTGACGCTGATGGCGATCTCCCGTCTACTGGTCAGCTGGTTGGTGATACCTGGGCAGTTGGTACGAACCTGAAATCCTGGAACGGTGCAAGCTGGGAAGACCTGGGTGACTTTGCTGGCCCTATTGGTCCACAGGGTGAGAAAGGTGATATCGGTGCAGGTATCAAGATCCTCGGTAAGAAAGCGTCTCAGGGGGATCTCCCTGCGTCTGCTGACGCCGTAGGTGACGGCTACATGATCGGTTCTAACTTCTGGGTGTGGGATGGTACTGCGTTCGTTGACGTTGGTGTCATTCAGGGTCCGAAGGGTGATCAGGGTATCCGTGGTCTGACCGGTGCTAAAGGTGAACAGGGTGAGAAAGGCCTGAAAGGGGACAAAGGTGATGCAGGTCCGAAATGGATCGTGCTGTCCGGCGTACCTAACACCGCAGTTGGTGTGATCGGTGACTTCTACCTGCGTACCGATAACCTGGATTATTTCCAGAAGACCGATACCACTACTTGGTCTCTGCTGGGTAAACTGGGCGGCGGTAACGTCTACGATGCGGAATTCGACGGTAAACGTAAAGTCCGTAAAGACGGTACCTGGATCGATCTGGTGTTCGACTTCGACCGCTACGATCTGAAACTGGTACAACCAACTGGCACCGACCTGGACTTCGCACTGGGTAACGGTTTCAAACTGTCTGCGACCACTACCAAAGCACTGACCATTAAGAACCTGCCGGCGGCAACGCGTATCGCGACCATCGTGATCGTGCTGGAAGGTAAAGGCGGTAACATCACCTTTACTAACGCCATCAGCTGGTCTCGTGGTGAAGCACCAACCCTGGGTGATACTCGTACGATCATCGCCCTGCTGTGGGATGGCGCAAACCTGACTGGTCAGGTTGCCATGACCGTGTAA

Genome Context

Tertiary structure

PDB ID

e494e0bf05dc2f9409a5f9f7b185005ddcd541634119c813dc64365c1d785797

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7023

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Complete genome sequence of Erwinia phage pEa_SNUABM_48	Kim,S.G., Lee,S.B. and Park,S.C.	2021-01-07	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature