Protein

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Genbank accession
XCO37826.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,64
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MADLKLGTTLGGAGIWSASNLPLLPSGGQLTYKGWRVYTENDRPTAEDINALSTINGGTVAKNTTFSQNVNVGQVLTANDILSNTRVQIARTGGAGANLTFRRYDVTGTPSSEIGIMDINVHNGSGQFVGAFNVNARPDGGNKIYFRAYKDGTQNTLLTLDSQTQQVTVEQGSFRVIGTSNLGLTNATSMAVSGAITANTVTPSNWANHDERYITGIPRGMSGNSFGAAVVTEKNDVLSVGGNVTDGPYGNTTYYGQVATYRRTLNSGVSLVQTYYDITSTWIRAATGSPGAWSYSAGDANGWRRIYDTSLPPTPAEVGAVNKSGDAMTGVLTLANISQPLKTPGGGVLANDGNVYINKSGFAGWIDALFLKNTGGTVTGTINQTGGYFDASGEGRGSWASQSTAKAPIFQNINTTSTSEYWPIIKQYYSQAGGAWSMGTLVNTNRFTVHYRTGSVDRQWYFDNSGEFVSYGDIISNSANGLRIAYNNRGFFIRNDGGNTYFMLTNSGDAWGSYNNLRPLYINNDTGSVTLGHAVGIGGNLSVNGTFTTANSSLSNGQLVLNGSGDSQVYFSRSNANPRDMRIFHSGDASRGNRIEISDSASYLVYFERHPSSGIQLVMNGNGSFSDVYIRSDERLKSNFSKIENALDKVDLLDGMVYDKANHIGGEETTREAGLVAQQLQEVLPEAVKKGVDGEQNEILTVSPTAVIALLVNAVKELREEVRELKSR
Physico‐chemical
properties
protein length:728 AA
molecular weight: 77888,00730 Da
isoelectric point:5,91480
aromaticity:0,09066
hydropathy:-0,33929

Domains

Domains [InterPro]
DC_0217
STR
14–727
DC_0217
IPR048390
ATT
465–522
IPR048390 IPR030392 Coil
IPR030392
CHP
632–728
IPR030392
XCO37826.1
1 728
Architecture
STR
ATT
STR
STR 14-464 | ATT 465-522 | STR 523-728
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO37826.1
1 728
Domain Start End Length (AA) Confidence
N-terminal 1 153 153 0,2949
Central domain 154 365 213 0,3273
C-terminal 366 728 362 0,8466
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-153
Central
154-365
C-terminal
366-728

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146010
[NCBI] 		3232194 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO37826.1 [NCBI]
Genbank nucleotide accession
PP889464 [NCBI]
CDS location
range 44328 -> 46514
strand +
CDS
ATGGCTGATTTGAAATTAGGTACAACGCTGGGTGGTGCGGGTATCTGGAGTGCTTCTAACCTTCCTCTATTGCCCTCTGGTGGACAATTAACGTATAAAGGCTGGAGAGTATACACGGAAAACGATCGTCCAACAGCGGAGGATATAAACGCCCTCTCGACGATTAACGGCGGCACGGTTGCAAAGAATACTACATTCAGTCAGAACGTGAATGTAGGGCAGGTGTTGACAGCAAATGATATTCTTTCTAATACTCGCGTACAAATTGCAAGAACAGGCGGTGCGGGTGCAAACTTAACATTTCGTCGTTATGACGTTACCGGAACCCCTTCTTCGGAAATTGGTATCATGGATATCAACGTACACAACGGTTCAGGTCAGTTTGTTGGTGCATTTAACGTTAACGCACGTCCAGACGGCGGTAATAAAATATACTTCCGTGCATACAAAGACGGAACACAGAATACATTATTAACACTGGATTCACAAACCCAACAGGTAACAGTTGAGCAAGGTTCTTTCCGTGTAATCGGGACTTCTAACCTCGGCTTAACGAATGCTACATCAATGGCAGTTAGTGGCGCGATTACTGCGAATACAGTAACTCCGTCAAACTGGGCTAACCATGATGAACGTTATATCACGGGTATTCCTCGCGGTATGTCTGGAAACAGTTTCGGGGCTGCTGTGGTTACTGAAAAGAACGATGTTCTGTCGGTCGGTGGTAACGTAACGGACGGTCCATATGGAAACACAACATATTACGGTCAGGTTGCCACATATCGCCGTACTCTGAATAGTGGTGTTTCTCTGGTTCAGACTTACTATGATATAACATCAACATGGATTCGTGCTGCGACGGGTTCTCCTGGTGCATGGTCTTATAGTGCGGGTGATGCTAATGGATGGAGAAGAATTTATGATACTTCGCTTCCTCCGACTCCGGCGGAAGTAGGGGCAGTCAATAAATCCGGTGATGCGATGACTGGTGTTCTAACACTGGCAAACATATCTCAACCACTTAAAACACCCGGCGGTGGTGTTCTGGCTAATGACGGGAACGTGTATATCAACAAAAGCGGGTTTGCAGGATGGATCGATGCACTGTTCTTGAAAAATACAGGAGGCACGGTAACAGGAACCATCAACCAAACAGGCGGTTATTTTGATGCATCGGGGGAAGGTAGAGGTTCTTGGGCTTCTCAAAGCACTGCAAAAGCTCCGATTTTCCAGAATATTAACACTACATCGACATCTGAATACTGGCCTATTATTAAGCAATATTATTCTCAGGCTGGCGGTGCTTGGTCTATGGGTACGTTGGTAAACACCAACAGGTTTACAGTCCATTACCGTACTGGATCGGTAGATCGTCAATGGTATTTTGATAACTCTGGTGAGTTTGTATCTTATGGTGATATTATTTCCAACTCAGCCAACGGATTGCGTATTGCATACAATAACCGTGGATTCTTTATCCGAAATGACGGTGGTAACACCTATTTCATGTTAACGAACTCAGGTGATGCATGGGGAAGTTATAATAACCTACGTCCTTTGTATATAAATAATGATACTGGTTCTGTAACGTTAGGTCATGCTGTTGGAATAGGCGGAAACCTCAGCGTCAATGGTACATTTACCACAGCAAACAGCAGTTTGAGCAACGGTCAATTAGTATTAAACGGTTCAGGCGATTCACAAGTTTATTTTTCACGAAGTAATGCTAACCCTCGCGATATGAGAATTTTCCATTCTGGTGATGCTTCTCGCGGGAACCGTATTGAAATCTCTGATAGTGCATCATATCTGGTTTACTTTGAGCGTCATCCGTCAAGTGGCATTCAGTTGGTAATGAACGGTAACGGTAGCTTTAGCGATGTGTATATTCGTTCTGATGAAAGACTGAAAAGCAATTTCAGTAAGATTGAAAATGCATTGGATAAAGTTGATTTGCTTGATGGTATGGTGTACGACAAAGCAAATCATATCGGGGGTGAAGAAACTACCCGTGAGGCTGGTTTAGTCGCACAACAACTGCAAGAAGTATTACCGGAAGCCGTTAAGAAAGGTGTTGATGGTGAACAGAACGAGATCTTAACTGTTTCTCCGACTGCGGTTATTGCGTTGTTGGTTAACGCAGTAAAAGAACTCCGTGAGGAAGTCAGGGAACTTAAATCCCGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9ba33187e0700bffde58a86fedaf2971a3e5806df6d8ed6088ebfa674739a0e6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6486
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank