Protein

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Genbank accession
WBY53978.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MADYKLSELNSIDTIRSDDLLHVRVKKRPEMLGDEDRRMTYQDFLASFKLERFVQIAGSTMTGDLGIVKLLYGGKAVFDPTGSSEVTIGDVLKTFKINANGLRLTIADASRSATVYHTLNKPSPNELGMRTNEENDARYARLAVTNSFQAKQSVVANGEQLTLKTPAGASEAYSAIVGRNANNDKTWAVGNLTQGSLDVHLENSRGSRITLGAIVSVNKALAITGQVKPSDWSNLDARYFTQTAANQRFAQLTTNNTFTGANTFRDMRVISNSAAVTLQCASANESFYLLGKDYQGGNSWFIGRGSSGTEVTLYNYVSDTSLVLSETARFNKSVEITGQVQPSNWTNIDSRYVPSSLTRVLARTDLTNTFTKAQIISTSNGNLFRLQTTVQDSELYMSAHNADGNRRWWLGIGGAGQTTVALTNDVTKKSINLGTNLDVNTHVNIVGQVRPSDFSNLDDRYYTQSAANSRYMLAGYTGGASEADGSDGVAWNAKTGLYTVSNAAKTYTYLVYNMFSGDGSTPSAQLKFQFQNGGMWYRTSRDAHGFEDNWSKVYTEAQKPKPSDIGAYSKAETDQKIAQAISDSTDLNKIYPVGIVTWFNSNVDPNTALPGLTWTYLNNGVGRTIRIAAANGSDVATTGGSDSVTLAVGNLPSHTHSFSATTSSFDYGTKGTNSTGGHTHSGSGSTSTNGEHTHYIEAWNGTGRGGDKMSSYAVSYRTGGSYTNAAGNHSHTFSFGTSGAGDHSHSVGIGAHSHTVSGNTGGTGSGSAFSVTNQFYKLMAWVRTA
Physico‐chemical
properties
protein length:785 AA
molecular weight: 84380,78030 Da
isoelectric point:8,21658
aromaticity:0,09172
hydropathy:-0,43465

Domains

Domains [InterPro]
IPR048388
161–248
IPR048388 G3DSA:6.20.80.10 G3DSA:6.20.80.10 IPR022246 IPR053827 IPR005003 IPR005003
IPR048388
277–356
IPR048388 IPR048388
WBY53978.1
1 785
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage REP10
[NCBI] 		3022452 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBY53978.1 [NCBI]
Genbank nucleotide accession
OQ174509.1 [NCBI]
CDS location
range 36460 -> 38817
strand +
CDS
ATGGCAGATTACAAGTTGAGTGAATTAAACTCAATCGATACAATCCGTTCAGATGACCTTCTTCATGTCAGGGTTAAAAAGAGACCTGAAATGCTAGGTGATGAAGACCGTCGAATGACCTATCAAGATTTCTTAGCATCTTTTAAGCTTGAAAGATTTGTTCAGATTGCTGGTAGTACTATGACGGGTGACTTAGGGATTGTTAAGTTACTTTATGGTGGTAAGGCAGTCTTTGACCCAACAGGCTCTTCTGAGGTTACTATTGGGGATGTTTTAAAGACTTTTAAAATCAACGCAAATGGTCTTAGACTAACTATTGCAGATGCTTCAAGGTCAGCAACTGTTTATCATACTCTGAATAAACCAAGTCCTAATGAACTTGGGATGAGAACTAATGAAGAGAATGATGCAAGATATGCAAGACTTGCTGTTACAAACTCATTCCAAGCTAAACAGAGTGTCGTAGCAAATGGTGAGCAGTTGACACTGAAGACCCCTGCGGGTGCAAGTGAGGCATACTCCGCTATTGTAGGTCGAAATGCCAATAATGATAAAACTTGGGCTGTTGGTAATCTAACTCAAGGAAGTCTTGATGTTCATCTCGAAAATAGCAGAGGTTCAAGAATCACTCTAGGTGCAATTGTGTCTGTTAATAAGGCTCTTGCTATTACTGGTCAGGTTAAACCCTCTGATTGGTCTAACTTAGATGCTAGATACTTTACTCAGACAGCAGCTAATCAGAGATTTGCACAGTTAACTACGAATAACACTTTCACAGGCGCTAATACATTTAGGGATATGCGTGTTATCTCGAATTCTGCTGCTGTTACACTACAATGTGCATCAGCAAATGAATCATTTTATCTACTTGGAAAAGATTATCAAGGTGGTAACTCATGGTTTATTGGTAGAGGTAGTTCTGGAACAGAGGTTACACTCTATAACTATGTTAGTGATACATCTTTAGTGTTGTCTGAGACGGCAAGATTTAATAAGTCTGTAGAAATCACTGGTCAAGTACAACCTTCTAATTGGACTAACATTGATTCAAGGTATGTTCCGAGTTCTCTGACAAGAGTTCTTGCAAGGACTGATTTAACTAATACTTTCACTAAAGCACAGATTATCTCTACTAGCAACGGCAACCTTTTTAGACTACAGACAACAGTACAAGATTCTGAACTCTACATGTCTGCACATAATGCTGATGGGAACAGGAGATGGTGGTTGGGTATTGGTGGTGCTGGTCAAACCACAGTGGCACTTACCAATGATGTAACAAAAAAGTCAATCAATCTTGGTACTAATTTAGATGTGAATACACATGTGAATATTGTTGGGCAAGTAAGACCAAGTGATTTCTCTAACTTAGACGATAGATACTACACCCAATCTGCCGCAAACTCTAGGTATATGCTTGCAGGTTATACTGGTGGAGCTTCAGAAGCAGATGGTAGTGATGGTGTTGCATGGAATGCAAAAACAGGATTATACACTGTCTCCAACGCAGCTAAGACGTATACTTACCTTGTGTATAACATGTTTTCGGGGGATGGTTCCACACCATCTGCACAATTAAAATTTCAGTTTCAAAATGGTGGGATGTGGTATAGGACATCAAGAGATGCCCATGGCTTCGAAGATAACTGGTCTAAAGTTTACACGGAAGCACAAAAACCAAAACCTTCAGATATTGGTGCATACTCTAAAGCAGAAACTGACCAGAAGATTGCACAGGCAATTAGTGACTCTACAGACCTTAACAAAATCTATCCAGTAGGCATTGTAACGTGGTTTAACAGTAATGTTGACCCTAATACAGCACTTCCTGGGTTAACTTGGACGTACCTGAACAATGGTGTTGGTAGAACTATCAGAATTGCAGCAGCAAACGGTTCAGATGTTGCTACAACTGGTGGTTCAGATTCTGTGACGTTAGCTGTTGGTAACTTACCATCACACACCCATAGTTTCTCTGCTACCACTTCATCTTTTGATTATGGTACGAAGGGAACTAACAGTACGGGTGGGCACACTCACTCTGGTAGTGGTTCTACTAGCACAAATGGTGAGCACACTCACTACATTGAGGCGTGGAATGGTACTGGTAGAGGTGGTGATAAGATGTCATCATATGCCGTATCATACAGGACGGGTGGGAGTTATACTAATGCAGCAGGGAACCACAGTCATACTTTCTCTTTTGGGACTAGCGGTGCTGGCGACCATTCCCACTCTGTAGGCATTGGTGCTCACAGCCACACAGTTAGTGGTAACACTGGTGGTACAGGTTCTGGTTCAGCATTTAGTGTTACTAACCAGTTCTACAAGCTAATGGCTTGGGTGAGAACTGCTTAA

Tertiary structure

PDB ID
bf3918373d5e02bdfeb905004293409be191eed6d18e2b955cc6a1e09107b456
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6813
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Swapped genetic code blocks viral infections and gene transfer Nyerges,A., Vinke,S., Flynn,R., Owen,S.V., Rand,E.A., Budnik,B., Keen,E., Narasimhan,K., Marchand,J.A., Baas-Thomas,M., Liu,M., Chen,K., Chiappino-Pepe,A., Hu,F., Baym,M. and Church,G.M. 2022 — GenBank