Protein

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Genbank accession
WFZ97414.1 [GenBank]
Protein name
capsid and scaffold protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALSGSTYTAFARHRLVLEWRASQNVAGNYSDVSIWLYLQSMDSYGALYAPAVGQAQVTANGVKQTENATSQLNAYQKKLLLAKVWRVNHNADGSKSFSISASYFVNVTYSGVYYGTISIPSFSVSLNKIPRKSSLNPVPDLNIPNKLGVSITRQSSSFTHNLTVWVANRTNPTLDNDSHWVYLNSIENVGTSGTFTFSVANFTEMFKRMGTSTEWVGKVKLWTNGLSESVPSQQRTFRIKPPMNAQASGGKLKVKAGEKITVSLSNFQSDGNFKYTGVFDYRGVSIPVATNVHANSMTLTLTQANVDSILKESPDDAGTWGQVRVTSYYNGVQYRTPWTGQHIDCTIPKEDYLPVINGTPTYTDLSAEATNVTGSNQVALQSKSNIRVTIPANFATGQGFSTIKTVQASLGGATKTANYNASGFNIDIGAPNEGTASSLVVTVLDGRGFSTSWTKTVQVYPYSNPDVNYTIARRNNFEVDTELAVSSSWAPVTIGGVNKNAITSVTYATKRSGTSTWGEETPVTFSTDGAKVIVPTTVVQLPNEYSWNFRLTIKDKFGSFSKEANISAGKPIMFIDAVRESVGFGNLTGTGENRNLNGVIEIEAERYHTTGKTGIQMNNSDISGLNGIYFSNDVMDNDGEGLHFIKSGKDVNSSNKKDYDYMYMRDGGFYVNHDGTPIFKVTDNGRMYYPATMLWSGGWYMSGTQNITPSKPMSECRNGWVLMWAKYQNETQTWADVVQVYLGKDLVTTHSGLGIRLLFGGYGNVIVHKYLTITDTQVKGNAQNTNTNLNAEKAILVRVHEW
Physico‐chemical
properties
protein length:803 AA
molecular weight: 88040,38790 Da
isoelectric point:8,92212
aromaticity:0,10585
hydropathy:-0,33400

Domains

Domains [InterPro]
DC_1676
ATT
4–122
DC_1676 DC_0631 IPR008577
IPR008577
STR
21–241
IPR008577 DC_1167
WFZ97414.1
1 803
Architecture
ATT
STR
STR
ATT 4-122 | STR 123-253 | STR 256-803
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WFZ97414.1
1 803
Domain Start End Length (AA) Confidence
N-terminal 1 132 132 0,0009
Central domain 133 388 257 0,8178
C-terminal 389 803 414 0,5197
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-132
Central
133-388
C-terminal
389-803

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage PEF1
[NCBI] 		3038317 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterococcus faecalis
[NCBI] 		1351 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WFZ97414.1 [NCBI]
Genbank nucleotide accession
OQ653963 [NCBI]
CDS location
range 86241 -> 88652
strand -
CDS
ATGGCTTTAAGCGGTAGTACATACACAGCTTTTGCACGGCATAGGCTTGTGTTAGAATGGAGAGCCTCCCAGAATGTTGCGGGCAACTACTCTGATGTAAGTATTTGGTTATACTTGCAGTCTATGGATTCCTATGGTGCTTTATATGCTCCTGCTGTTGGACAAGCACAGGTAACAGCTAATGGAGTTAAGCAAACCGAAAATGCAACATCACAATTGAATGCTTATCAGAAAAAACTATTGCTAGCCAAAGTTTGGCGTGTAAATCATAACGCAGATGGTAGCAAGTCTTTTTCTATATCTGCTAGTTACTTCGTAAACGTAACCTATTCAGGCGTTTACTACGGAACAATCTCGATACCGTCATTCTCGGTTTCATTAAATAAAATTCCACGTAAAAGTTCGTTAAACCCTGTGCCAGATTTAAATATTCCTAATAAACTAGGGGTAAGTATTACCCGACAAAGTTCTAGTTTTACGCATAATTTAACTGTTTGGGTAGCCAATAGAACAAACCCTACATTAGATAATGACTCCCATTGGGTGTATTTAAACAGTATTGAGAACGTAGGTACAAGTGGTACATTCACATTTAGTGTAGCAAACTTCACAGAAATGTTCAAGAGGATGGGTACAAGTACCGAATGGGTAGGCAAGGTGAAGCTCTGGACGAATGGTTTAAGCGAGTCAGTGCCGAGCCAACAACGAACCTTCCGAATAAAACCTCCAATGAACGCACAGGCTTCTGGGGGTAAGTTAAAAGTAAAAGCAGGAGAAAAGATTACTGTTAGTCTAAGTAACTTCCAATCTGACGGTAACTTTAAATATACAGGTGTTTTTGATTATCGAGGGGTATCCATACCAGTAGCAACAAATGTACATGCAAACTCTATGACTCTTACATTAACCCAAGCAAACGTGGATTCTATCTTGAAAGAATCTCCGGATGATGCAGGAACATGGGGGCAAGTACGAGTAACAAGTTACTACAATGGTGTACAATATCGAACTCCTTGGACTGGACAGCATATTGATTGTACCATTCCTAAAGAAGATTACTTACCTGTAATAAACGGAACACCGACTTATACTGACTTAAGTGCCGAAGCTACTAACGTTACCGGAAGTAACCAAGTAGCATTACAAAGTAAGTCTAATATCCGTGTGACTATTCCGGCTAACTTTGCCACAGGTCAAGGATTCTCAACAATTAAAACCGTGCAAGCTTCATTAGGTGGGGCTACAAAAACTGCTAACTATAATGCTTCTGGTTTTAACATTGATATTGGTGCTCCAAATGAAGGTACTGCTTCTTCATTAGTTGTTACTGTTCTAGACGGTCGAGGATTTAGTACATCTTGGACAAAAACAGTTCAAGTATATCCATATAGCAATCCAGATGTTAACTATACGATTGCCCGTAGAAACAACTTTGAAGTAGATACAGAATTAGCTGTTTCAAGTAGTTGGGCGCCTGTTACTATCGGTGGCGTAAACAAAAATGCAATTACGTCAGTAACCTACGCAACTAAACGTTCAGGTACAAGTACATGGGGAGAAGAAACACCAGTAACTTTCTCCACAGATGGGGCTAAAGTTATTGTCCCAACAACCGTTGTTCAGTTACCTAATGAGTACAGTTGGAATTTCAGACTAACTATCAAAGATAAGTTTGGTAGCTTCTCTAAAGAAGCAAATATTTCTGCCGGAAAACCTATTATGTTTATTGATGCTGTTCGTGAATCTGTAGGTTTTGGTAACCTGACAGGTACAGGGGAAAATAGAAACCTTAATGGTGTAATTGAAATTGAGGCGGAACGCTACCATACTACAGGTAAAACTGGTATCCAAATGAATAACAGTGATATTTCTGGGTTGAATGGAATATATTTCTCAAATGACGTAATGGATAACGATGGTGAAGGATTGCATTTTATCAAGTCAGGGAAAGACGTTAACTCTTCCAATAAAAAAGACTACGATTATATGTACATGAGAGACGGCGGATTCTATGTTAACCATGATGGTACTCCAATCTTTAAAGTTACTGATAACGGTCGCATGTATTACCCTGCTACAATGCTGTGGTCTGGTGGTTGGTATATGTCCGGTACACAAAATATAACCCCGTCAAAACCAATGTCAGAGTGTAGAAATGGATGGGTACTCATGTGGGCTAAATACCAAAATGAAACACAAACATGGGCTGATGTTGTACAAGTGTATTTAGGTAAGGATTTGGTAACAACACATAGCGGTTTAGGTATCAGACTATTATTTGGTGGATATGGTAATGTTATCGTTCATAAATACTTGACTATTACTGATACACAGGTAAAGGGTAACGCACAAAATACTAATACTAATTTAAATGCTGAAAAAGCTATTTTAGTTCGTGTTCACGAATGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
22586f496167c4496c877f98a7431d639a3163451712e11364c6517189768606
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3237
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and antibacterial effect of bacteriophage cocktails to control Enterococcus faecalis isolated from different foodborne sources and its application in milk Wang,C. 2020-10 — GenBank