Protein

View in Explore
Genbank accession
QZI86139.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGRVTGSWERPIQGVSQQSDKDRIDGQCTKQENLIPSPLDGLIKRTGTRHLKKLMDSVSTDSLWYSYNRGGEESYVILVEPNKTPRVFDILGNERTVNVTSGDTSYYQSANPKRDLRMSTIADYTFLLNTTKTVTELPDKSPKNPDTAIVYCQFATYARDYIIEAEGIQIAKYTTPLGDDPSHANNVKTNFIAETLANQVNSISFATENHSAIPVGSPTTHYEFTTSSTPSKIISVFNLSSNVNVTFTNVGNIIRVTSGTSAGDVLRITYEHTGSSNYTAEVHGNTIFITSKSGGSFSINTVDSADGNDLVAIQDRVKQTTNLPPYAPDNYIVKVQNAEGFEQNSYWLKAVPDTGSDQEGSGVKWEESLAQDVTYKMNKNTLPHTLVSEADGTFTLSLGEWEDRRVGNEDTNPYPSFIDQKISSIGTFQNRVLFTSGEAAVFSRTNFFFDFFRETTQTESDSDPIDAFADADEINNLLHHAVLDGDIIFFAENGQFLIDGSKPITKATIIFKKVTSYPMNTLAKPAVTGESVMFSFISGKYTGIREMFTDSFTDTKRARPITEHVAEYIEGRAVDLVASPNINTLFIRTDTSANELYVYDWLWSGDQKVQAAMHKWIIGGSVLFAKFIQDRVYFIIDRGNGIYLEQMPIGNDEDDNGLDFPVRLDQRTVTTATWSGGRWEWTLPYSITDTDKLVFVRGEGCWEEDRGTSVIFETDGTKYWSYDDLADTLQVQSVSLNAGTTFTSKYIPTKPYLKDGNGRAMGLDRFTLGKVSMNYDSIGNTDVSVTDRRSRRTWKYNYNGRVFGGWNNRVGFAPLDSGRFQFPIRLESSNAEIEIVTDDYRPFILRDMEWEGMFKQRGRRL
Physico‐chemical
properties
protein length:861 AA
molecular weight: 96558,10800 Da
isoelectric point:4,99282
aromaticity:0,11034
hydropathy:-0,46632

Domains

Domains [InterPro]
IPR058003
TTP
1–203
IPR058003 IPR058003
DC_1891
ATT
1–275
DC_1891
QZI86139.1
1 861
Architecture
ATT
TTP
ATT 1-275 | TTP 276-860 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QZI86139.1
1 861
Domain Start End Length (AA) Confidence
N-terminal 1 163 163 0,8289
Central domain 164 362 200 0,5488
C-terminal 363 861 498 0,2532
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-163
Central
164-362
C-terminal
363-861

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 15E36.1
[NCBI] 		2859290 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio crassostreae
[NCBI] 		246167 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI86139.1 [NCBI]
Genbank nucleotide accession
MW865291 [NCBI]
CDS location
range 32884 -> 35469
strand +
CDS
GTGGGCAGAGTAACAGGTAGCTGGGAGCGTCCGATTCAGGGCGTATCTCAACAGTCTGATAAGGATAGAATTGATGGGCAGTGTACCAAGCAAGAGAACCTTATCCCATCTCCGTTAGATGGACTAATCAAACGAACAGGTACACGACACCTGAAGAAACTAATGGACTCAGTATCAACTGACTCTCTTTGGTACTCTTACAATCGTGGTGGTGAAGAGTCTTATGTTATACTGGTTGAACCTAACAAGACACCGAGAGTGTTTGATATCTTAGGTAATGAACGTACTGTCAATGTGACAAGTGGCGACACTTCATATTACCAGTCAGCTAACCCAAAGCGTGACCTGCGTATGAGCACTATCGCTGATTACACGTTCCTACTTAATACAACTAAGACGGTTACGGAGTTACCTGATAAGTCACCTAAGAATCCAGACACAGCTATTGTGTACTGTCAATTCGCTACGTATGCTCGTGACTATATCATCGAAGCAGAAGGTATTCAGATAGCTAAGTACACTACTCCGCTTGGTGATGACCCGAGTCATGCTAATAACGTCAAGACTAACTTCATAGCAGAGACACTAGCTAATCAGGTTAATAGTATAAGCTTTGCAACTGAGAACCACTCAGCTATTCCTGTAGGTTCACCTACTACACATTATGAGTTCACAACAAGCAGCACACCTAGCAAGATAATTAGCGTGTTCAACCTCTCCTCTAATGTTAATGTAACCTTCACGAATGTAGGTAATATCATACGAGTAACTAGTGGAACTTCTGCTGGTGATGTTCTTCGTATTACTTATGAGCACACTGGTAGCTCTAACTACACAGCAGAAGTTCATGGTAATACTATCTTCATTACAAGTAAGTCAGGTGGTAGCTTTTCTATCAACACAGTAGATAGTGCAGATGGTAATGACCTTGTAGCTATTCAGGATAGAGTCAAGCAGACCACCAACCTACCTCCATATGCACCAGATAACTACATTGTCAAGGTTCAGAATGCTGAAGGGTTCGAGCAGAACTCTTACTGGTTGAAGGCTGTGCCCGATACAGGCAGTGACCAAGAGGGTTCTGGTGTTAAGTGGGAGGAGTCACTGGCTCAAGATGTCACCTACAAGATGAACAAGAACACACTACCTCACACTCTAGTTAGTGAAGCAGATGGTACGTTCACGTTATCACTAGGCGAGTGGGAAGACAGACGTGTTGGCAATGAAGACACTAACCCTTACCCATCTTTCATTGACCAGAAGATTAGTAGTATTGGTACGTTCCAGAACAGAGTGCTGTTCACTTCAGGTGAAGCAGCGGTGTTCAGTCGTACTAACTTCTTCTTTGACTTCTTCAGAGAGACTACTCAAACTGAGTCAGACTCTGACCCTATTGATGCTTTCGCTGATGCAGATGAAATCAATAACCTATTGCACCATGCTGTGCTTGACGGTGATATCATCTTCTTCGCTGAGAACGGACAGTTCCTTATTGATGGCAGCAAGCCGATAACCAAGGCTACCATCATATTCAAGAAGGTAACTTCCTATCCAATGAACACCCTAGCTAAACCAGCGGTGACAGGTGAGAGTGTCATGTTCTCGTTTATCTCTGGTAAGTATACTGGTATCCGTGAGATGTTCACTGACTCCTTCACTGATACTAAACGTGCTCGTCCTATTACAGAGCATGTGGCTGAGTACATTGAAGGTAGAGCGGTAGACCTTGTTGCAAGTCCTAACATCAACACCTTGTTCATTCGTACTGATACTAGTGCCAATGAGTTATACGTGTATGACTGGTTATGGTCTGGAGACCAGAAGGTTCAGGCTGCTATGCACAAGTGGATTATCGGTGGTTCAGTGCTGTTCGCTAAGTTCATTCAGGACAGAGTATACTTTATCATTGACCGTGGTAACGGTATCTACCTAGAGCAAATGCCAATAGGTAATGATGAAGATGATAACGGACTAGACTTCCCTGTTCGTCTTGACCAACGTACAGTAACTACTGCAACGTGGTCTGGTGGCAGATGGGAGTGGACGCTACCTTACAGCATCACTGATACGGATAAGCTTGTCTTCGTCCGTGGTGAAGGTTGTTGGGAAGAGGATAGAGGTACTAGTGTTATCTTTGAAACAGATGGAACTAAGTACTGGTCATATGATGACCTAGCAGATACATTGCAGGTGCAGTCAGTCAGCTTGAATGCTGGTACTACATTTACATCTAAGTACATCCCGACCAAGCCTTATCTAAAGGACGGTAACGGGAGAGCTATGGGGCTAGACAGGTTTACGCTTGGCAAGGTCTCTATGAACTATGACAGCATTGGTAACACTGATGTATCTGTCACAGACAGACGCTCTCGTCGTACTTGGAAGTATAACTACAACGGTCGTGTGTTTGGTGGTTGGAATAACAGAGTTGGATTTGCTCCATTAGACTCTGGTCGTTTCCAATTCCCTATACGTCTTGAATCAAGCAATGCAGAGATTGAGATAGTAACAGATGACTATCGACCTTTCATTCTAAGAGATATGGAATGGGAGGGTATGTTCAAACAACGAGGAAGGAGATTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
98ade16cf452390af2b2a84b84047832db04732de7af6be03a8fb2142fbb0585
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3021
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Rapid evolution of virus immunity in the wild Piel,D., Bruto,M., Labreuche,Y., Blanquart,F., Chenivesse,S., Lepanse,S., James,A., Garcia Cruz,R., Dubert,J., Petton,B., Lieberman,E., Wegner,M.K., Hussain,F.A., Kauffman,K.K., Polz,M.F., Gandon,S., Bikard,D. and Le Roux,F. 2024-02-09 — GenBank