Protein

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Genbank accession
CAH1069841.1 [GenBank]
Protein name
inner membrane transport protein YfaV
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSLTQSMELSAEAIAEKQLIKKVAWKIMPLIMVCYLFAFFDRINISFAKFQLQADLSLSNTAYGLGASLFVIGYVIFEVPSNLLLHKFGARKWIARIMISWGVATALMVFVTTEWQFYVLRFLIGAMEAGFAPGVLYYMTLWFPQSYRGRIISLFFLASAFSGIFGGPISGVLLSSLDGVMNMRGWHWLFLVGGVPCVLLGLCVLTYLKDRIDDAQWLSSSEKVHLKRLVEPKQPEKASHSLWAAIKTPGLLILGAIYFLIQIASYGLNFWGPQLIKSSGIDDTQMIGFLSAIPYLMGAITMVIVGRLADKSGERLKFTAGLLSLGAIGFFTAGFFDANPVVVVISLALLGAGIVAAIPSFWNLPPKVLVGAGAGAAGGTALINTLGQVGGIVSPIMVGHIKDITGSTTPALYIIASLCVVCIALLIWATPKRLKEKG
Physico‐chemical
properties
protein length:438 AA
molecular weight: 47404,94760 Da
isoelectric point:9,38449
aromaticity:0,11644
hydropathy:0,74680

Domains

Domains [InterPro]
IPR036259
STR
13–434
IPR036259
PTHR43791
Unmapped
13–426
PTHR43791
IPR036259
STR
16–222
IPR036259 IPR036259
G3DSA:1.20.1250.20:FF:000018
Unmapped
17–223
G3DSA:1.20.1250.20:FF:000018
cd17319
STR
25–427
cd17319
IPR020846
STR
27–434
IPR020846
IPR011701
STR
31–395
IPR011701
CAH1069841.1
1 438
Architecture
STR
STR 13-437 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAH1069841.1
1 438
Domain Start End Length (AA) Confidence
N-terminal 1 218 218 0,1067
Central domain 219 417 200 0,2268
C-terminal 418 438 20 0,9947
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-218
Central
219-417
C-terminal
418-438

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage MD-2021a
[NCBI] 		2899278 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAH1069841.1 [NCBI]
Genbank nucleotide accession
CAKLQF020000001 [NCBI]
CDS location
range 176705 -> 178021
strand +
CDS
ATGAGTTTAACGCAAAGCATGGAATTATCGGCTGAAGCAATTGCCGAAAAGCAATTAATAAAAAAAGTAGCATGGAAAATCATGCCATTAATTATGGTGTGTTACTTATTTGCTTTTTTTGATCGTATCAATATTAGTTTTGCCAAGTTTCAGTTACAAGCTGATTTATCTCTAAGCAATACAGCTTATGGCCTTGGTGCCAGTTTGTTTGTAATTGGGTATGTAATATTTGAAGTACCTAGTAATTTATTGCTACATAAATTTGGTGCGAGAAAATGGATTGCGCGCATCATGATTTCTTGGGGTGTTGCAACGGCCTTAATGGTATTTGTGACCACAGAGTGGCAATTTTATGTATTACGTTTCTTGATTGGTGCAATGGAGGCTGGCTTTGCTCCGGGTGTGCTGTATTACATGACGCTTTGGTTTCCTCAAAGCTATCGTGGTCGAATTATTTCATTATTTTTCCTTGCTTCTGCTTTTTCAGGCATCTTTGGAGGACCAATTTCAGGGGTGTTATTGTCATCACTTGATGGTGTGATGAACATGCGTGGATGGCATTGGTTATTTTTAGTCGGTGGCGTGCCTTGCGTTTTACTGGGTCTTTGTGTTCTTACTTATTTAAAAGATCGTATTGATGATGCGCAATGGCTATCATCCTCAGAAAAAGTTCACTTAAAACGTTTGGTTGAACCTAAACAACCAGAAAAGGCCTCTCATTCATTATGGGCTGCCATTAAAACCCCGGGATTATTAATTTTAGGTGCTATCTATTTTCTGATTCAGATTGCATCTTATGGTTTAAATTTCTGGGGGCCACAGTTAATAAAAAGCTCAGGTATTGATGATACGCAAATGATTGGTTTTCTTAGTGCCATTCCATACCTCATGGGAGCAATTACAATGGTAATTGTTGGACGTTTAGCAGATAAATCTGGGGAGCGTTTAAAATTTACTGCTGGTTTACTCTCTTTAGGTGCTATTGGTTTCTTTACCGCCGGTTTCTTTGATGCGAACCCCGTTGTTGTGGTCATTTCGCTTGCTTTATTAGGGGCAGGTATTGTTGCTGCAATTCCTTCTTTCTGGAATTTACCACCTAAAGTCTTGGTCGGAGCTGGGGCGGGGGCTGCGGGTGGTACAGCGCTCATTAATACATTAGGGCAAGTAGGGGGAATTGTTAGTCCTATTATGGTTGGTCATATTAAAGACATAACAGGGAGTACAACGCCTGCGCTGTATATTATTGCAAGCTTATGTGTTGTGTGTATTGCACTACTAATATGGGCTACGCCAAAACGGTTAAAAGAAAAAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8465854b86d06e643948ca57ee0a3f84510467731156e6cd607aad11cda92539
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9528
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50