Protein

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Genbank accession
QBX06125.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
Protein sequence
MSKGTQIFNHVIDDAGTVTVEVEGTSFDGLTGGNNDLQTCLELVQAHALQPLPDYPIASTSVAGITLLSDNAAVADELNNTSAVTPSALNYWMENHATATELQYGFVKLITNSTIDNIDPTSAVEEAQKHAFTLKTLNYALNTRFYATESSPGAVRLATYAQATTTGTLSNSVAMTPQRVKEMLDVWANTTASDATETTKGLIRLANATEVNSTSASENNLAISPYRFNERTATTTRKAGFYLPNSTVANARTSNDHAVTVGTLDLFTATSSRVGVAKLANNLTTNDATQALSAAMGYKLNNEKIGVSGGTVTGTLKIDDVQSVSGTQLMTNGLIESSAMLNMYPVGAIYMSLESTSPATLFGGTWSRIAEGRVLVSEGTHGGRTFNVRQTGGEYEVILTEETMPTHKHAGWGDRWTYGGNGLGFGVAYEYGRSNPGSGRTDNDNYLYYSSPEGGGQPHNNVQPYYTVYMWERTA
Physico‐chemical
properties
protein length:475 AA
molecular weight: 50779,46670 Da
isoelectric point:4,98793
aromaticity:0,08000
hydropathy:-0,30926

Domains

Domains [InterPro]
DC_0176
STR
1–431
DC_0176
IPR054500
STR
281–303
IPR054500 SSF88874
IPR053827
ATT
343–474
IPR053827
QBX06125.1
1 475
Architecture
STR
ATT
STR 1-342 | ATT 343-474 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Va3
[NCBI] 		2563734 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX06125.1 [NCBI]
Genbank nucleotide accession
MK568540.2 [NCBI]
CDS location
range 115768 -> 117195
strand -
CDS
ATGAGCAAAGGAACTCAAATTTTCAATCACGTGATTGACGATGCGGGTACGGTTACAGTTGAAGTCGAAGGTACTTCCTTTGATGGTCTTACTGGGGGTAATAACGATCTCCAAACGTGTCTTGAGCTTGTACAAGCTCATGCACTTCAACCATTACCCGATTACCCTATAGCATCAACATCTGTCGCGGGTATTACATTGTTAAGTGATAATGCAGCAGTCGCAGATGAGCTTAATAACACAAGCGCGGTGACACCATCTGCATTAAATTATTGGATGGAAAATCACGCGACTGCAACAGAACTTCAATACGGTTTTGTGAAGCTGATTACAAACAGCACGATTGATAACATTGACCCGACATCCGCAGTAGAAGAAGCACAGAAACATGCATTCACGCTTAAAACATTGAACTACGCGTTGAATACTCGTTTCTATGCAACTGAATCTTCGCCGGGTGCTGTACGGCTAGCGACATATGCACAAGCAACGACAACAGGCACATTGTCTAATAGTGTGGCTATGACCCCACAGCGAGTTAAGGAAATGCTTGACGTGTGGGCGAATACTACCGCATCAGATGCTACAGAAACGACGAAAGGGTTGATTCGATTAGCAAATGCAACTGAAGTAAACAGCACATCAGCATCAGAAAACAATCTAGCAATTTCACCGTATCGATTCAATGAACGCACAGCGACAACTACGAGAAAGGCAGGTTTCTATCTACCGAACTCAACAGTTGCAAATGCGCGTACATCTAATGACCATGCAGTCACAGTCGGTACATTAGATTTATTCACTGCGACTAGCTCACGTGTTGGTGTTGCGAAACTTGCAAACAATCTAACAACAAACGACGCGACTCAAGCACTAAGTGCTGCAATGGGTTATAAGTTGAATAATGAAAAGATTGGGGTTTCAGGCGGGACAGTAACTGGTACATTGAAAATCGACGATGTTCAATCTGTAAGTGGTACTCAGTTAATGACAAATGGTCTGATTGAATCATCAGCTATGTTGAATATGTACCCTGTTGGTGCTATTTACATGTCACTTGAATCTACATCACCAGCTACGCTATTCGGCGGAACATGGTCTAGAATTGCAGAAGGTCGCGTGCTTGTATCTGAAGGTACACATGGGGGTAGAACATTCAACGTAAGACAAACAGGTGGTGAATACGAAGTTATCTTAACTGAAGAAACAATGCCAACTCACAAACACGCGGGTTGGGGTGATCGTTGGACTTACGGTGGCAACGGACTAGGGTTTGGAGTTGCATACGAATATGGTAGAAGCAACCCAGGTTCAGGTCGCACTGATAACGACAACTACTTGTATTACTCATCACCAGAAGGTGGTGGTCAACCACATAATAACGTACAGCCATACTATACTGTTTACATGTGGGAAAGAACTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0e56c7a3ebce0ed2329b03395fe768b4d944d2c7c0211e298a778a7f026303c0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7356
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50