Protein

View in Explore
Genbank accession
QNO00044.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,75
Protein sequence
MNLTPNDMLKALASIGLDGIISAGLVSSAGVKPLRRNVAIYGDSRTANCSSGSLPNKITENYGYASWLGQYSDGRIFFEPAFNFGVGGNTSAQWAARVGDVIASPSDVVVCLISTNDRTADFTLAQTQQNIEGVVMKLKQAGKIVVFINETPRGGANALTAPRQAIHEQVRAWINSYLPKLGVRVVDVWDKMTDTASVTVDGLHFNPVGANIVGQALAREIQDLFNSPVPLPRVTSAYDSATNPFGQINTNALLTGTTGTKGGSANTTGDVATGYTVAGSSWTGMTVVASKEAASVGEAQVFKFSGTPTTSGALYTFEQVISLANAKLAANIKAVADIEFEMTGCLGVSLDFRFLDSGTFNSKCCDRYQDGFPMSPIKVSGVQETPTTVITAGCTEVKIRVAVYGSQNVPMSGTVKIKQLAAIAA
Physico‐chemical
properties
protein length:425 AA
molecular weight: 44638,05430 Da
isoelectric point:6,74062
aromaticity:0,07529
hydropathy:0,06024

Domains

Domains [InterPro]
IPR051532
27–224
IPR051532
IPR036514
31–223
IPR036514
SSF52266
37–225
SSF52266
cd00229
38–219
cd00229
IPR013830
41–210
IPR013830
QNO00044.1
1 425
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phiPsa300
[NCBI] 		1460362 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNO00044.1 [NCBI]
Genbank nucleotide accession
MT670418.1 [NCBI]
CDS location
range 29896 -> 31173
strand +
CDS
ATGAACCTTACTCCAAACGATATGCTGAAAGCTCTAGCCTCTATTGGCCTAGATGGTATTATCTCTGCTGGCCTTGTATCGAGTGCTGGCGTCAAGCCGCTACGTCGTAACGTTGCCATCTATGGTGACAGTCGCACTGCAAACTGCTCTAGCGGCTCCCTCCCAAACAAGATCACAGAAAACTATGGCTATGCCTCTTGGCTCGGCCAATACTCTGATGGTCGTATCTTCTTTGAACCAGCATTCAACTTTGGTGTAGGTGGAAACACTTCTGCTCAGTGGGCTGCTCGCGTTGGTGATGTAATCGCCTCTCCTTCTGATGTTGTTGTTTGTCTTATCTCGACTAACGACCGCACTGCTGACTTCACACTTGCTCAAACTCAACAGAACATTGAAGGTGTTGTGATGAAGTTGAAACAGGCTGGTAAGATTGTTGTGTTCATCAACGAGACTCCACGCGGTGGTGCAAACGCCCTGACAGCTCCAAGACAAGCCATCCATGAACAAGTGAGAGCTTGGATCAACAGCTACCTTCCAAAGCTTGGTGTGCGTGTTGTGGACGTTTGGGACAAGATGACTGATACCGCTTCCGTCACTGTAGACGGTCTACACTTCAACCCAGTTGGTGCAAACATCGTCGGGCAAGCCCTTGCAAGAGAAATCCAAGACCTGTTCAACTCTCCAGTGCCCCTGCCTCGCGTTACAAGCGCGTATGACTCTGCTACCAACCCGTTTGGTCAGATCAACACGAACGCCCTTCTAACAGGCACCACAGGGACTAAGGGAGGCTCTGCCAATACTACAGGTGACGTAGCCACTGGTTACACTGTAGCTGGAAGCTCTTGGACTGGTATGACTGTTGTTGCTTCTAAGGAAGCCGCATCTGTAGGTGAAGCTCAAGTGTTCAAGTTCAGTGGTACACCAACTACATCTGGTGCATTGTACACATTCGAACAAGTGATCAGCCTTGCCAACGCAAAACTTGCAGCAAACATTAAAGCTGTTGCTGATATTGAATTCGAAATGACTGGATGCCTCGGCGTTAGTCTCGACTTCCGCTTCCTTGACTCTGGCACTTTCAACTCTAAGTGCTGCGACCGTTACCAAGATGGATTCCCAATGTCTCCAATCAAAGTGAGCGGTGTTCAAGAAACTCCAACTACAGTAATCACAGCAGGATGTACAGAAGTTAAAATTCGTGTTGCTGTATACGGCAGCCAAAACGTCCCAATGAGTGGGACGGTAAAGATTAAACAACTCGCAGCAATCGCTGCTTAA

Tertiary structure

PDB ID
10c95f5d835e6b806ebf4b781c1762f4092f0ed72e5eb62f7bb84d62a221e6df
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8243
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Pseudomonas phiPsa374-like phages Warring,S., Malone,L.M., Easingwood,R.A., Rigano,L., Frampton,R.A., Lopez Acedo,E., Templeton,M.D., Kleffmann,T., Bostina,M. and Fineran,P.C. 2024-10 — GenBank