Phage RBP Database

Genbank accession

XGU09714.1 [GenBank]

Protein name

hypothetical protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,99

Seq2Symm

C1 confidence 0,862

C1	0,862
C3	0,238
D3	0,002

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MADILLKYLTDLPAATEANDEDLMHINQGGNDKSITISSLILSMVNGVYPPGITIWFNTSANPNALFPGTLWARVPGAGRVVRIANSSGSDISETGGSNKVSITTSNLPAHNHEFSGQTETFDYGTKSTTTNGSHTHSLTAYHGEWKTDNGRISDGALGTSFTATTAASGSHSHQTNIGAHQHDFQGSTSDTGEGALLDVTNQYITQAAWYRVS

Physico‐chemical properties

protein length:	214 AA
molecular weight:	22658,37690 Da
isoelectric point:	5,41945
aromaticity:	0,07477
hydropathy:	-0,39720

Domain architecture

XGU09714.1

1 214 aa

ATT 45–213 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR053827
ATT

IPR053827

XGU09714.1

1214 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0033
STR

DC_0033

XGU09714.1

1214 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR053827	ATT	DC_0313	45	213	InterPro cluster	Baseplate structural protein Gp10, C-terminal domain	C-terminal	Medium	Text match	489 proteins / 489 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

XGU09714.1

1 214 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	110	110	0,4517
Central domain	111	203	94	0,0024
C-terminal	204	214	10	0,9968

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Enterobacter phage vB_Ecl_MII_001 [NCBI] · taxon 3344472

Enterobacter phage vB_Ecl_MII_001

Host

Enterobacter cloacae [NCBI] · taxon 550

Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Enterobacter Enterobacter cloacae

Genbank protein accession

XGU09714.1 [NCBI]

Genbank nucleotide accession

PQ039552 [NCBI]

CDS location

range 42285 -> 42929
strand +

CDS

ATGGCTGACATTCTCCTCAAATACCTAACTGATTTACCTGCCGCCACAGAGGCTAATGACGAAGACCTCATGCATATAAATCAGGGTGGAAATGATAAATCCATAACAATCAGCTCTCTCATTTTATCGATGGTAAATGGAGTGTATCCGCCCGGAATTACCATCTGGTTTAATACATCAGCTAATCCTAACGCTCTGTTCCCGGGGACATTGTGGGCGAGAGTTCCAGGCGCTGGTAGAGTGGTAAGAATTGCGAATTCATCGGGTTCTGACATTTCAGAAACCGGTGGCAGCAACAAAGTCAGTATAACGACTTCAAATCTCCCTGCTCATAATCACGAATTTTCCGGACAAACAGAAACGTTCGACTATGGCACAAAATCGACAACTACTAATGGTAGCCACACCCACTCGTTAACGGCTTATCACGGAGAGTGGAAGACAGATAACGGCAGGATATCAGATGGTGCTCTAGGCACGTCATTTACGGCCACCACAGCGGCTTCAGGTTCACACAGCCACCAAACGAATATCGGCGCTCACCAGCATGACTTCCAGGGTAGCACTAGCGATACCGGTGAAGGCGCTCTTCTTGACGTGACAAACCAATACATTACTCAAGCGGCATGGTACAGGGTTTCTTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)