Phage RBP Database

Genbank accession

AGY46940.1 [GenBank]

Protein name

tail spike protein

RBP type

TSP

Evidence DepoScope

Probability 0,98

TSP

Evidence GenBank

Probability 1,00

TSP

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,75

TSP

Evidence RBPdetect2

Probability 0,82

TSP

Evidence UniProt/TrEMBL

Probability 1,00

Seq2Symm

C3 confidence 0,996

C3	0,996
D3	0,007
C1	0,005

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MGLHVQKSQLSVIKLGDYGAVGDGVTDDTTSFINLEAEHKGKIINLEFKTYLVDKGFSGNFYINGSFKVGDNTFAAPYTLPYANNSNIFMGENSGVNTDKYPVYMASAGGYSNIGIGKNALKSNTEGWRNVAIGDGALVNNTLGHYNIAVGDEALRDNIGSRNGDSTDNGSRNTAVGSNTMCYNTTGYCNTAMGRNALHTNFTGYHNTAIGAAALSGNAPYVNGVVVPDDPKHGNYNTAVGSEALFRGNSDHNTAVGRSAAWNTKNGARNVAIGSEALYYNEANVTYDDKTTAGAGNTAVGTAAMKYMQDGSQATLVNNSSAIGYGARVSGDNQVQLGGSGTTTYSYGAVQSRSDQRDKTDIKDTELGLDFLLKVRPVDFRWDYRDDYQEIDEEGNLITHEKDGSRSGNRFHHGVIAQEIQEVIQKTGKDFGGLQDHKINGGTDVLSIGYEEFIAPIIKSIHELHKMVSDLSDRISELENK

Physico‐chemical properties

protein length:	481 AA
molecular weight:	51645,94440 Da
isoelectric point:	5,31566
aromaticity:	0,08524
hydropathy:	-0,52079

Domain architecture

AGY46940.1

1 481 aa

ATT 15–67 · STR 233–347 · RBD 348–438 · CHP 439–475 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

G3DSA:3.30.750.60
ATT

G3DSA:3.30.750.60 IPR011049 IPR030392

IPR036388
RBD

IPR036388 Coil

IPR030392
CHP

IPR030392

AGY46940.1

1481 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1988
STR

DC_1988

DC_0780
STR

DC_0780

AGY46940.1

1481 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:3.30.750.60	ATT	G3DSA:3.30.750.60	15	67	Merged direct domain	G3DSA:3.30.750.60	N-terminal	Low	Positional only	2 proteins / 2 hits
IPR011049	STR	IPR011049	233	347	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
IPR036388	RBD	IPR036388	342	438	Merged direct domain	Winged helix-like DNA-binding domain superfamily	C-terminal	Low	Positional only	96 proteins / 96 hits
IPR030392	CHP	DC_0088	354	475	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
IPR030392	CHP	DC_0088	354	428	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
Coil	Unmapped	-	461	481	Coils	Coil	-	-	-	-

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

AGY46940.1

1 481 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	28	28	0,9508
Central domain	29	328	301	0,9887
C-terminal	329	481	152	0,9764

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Bacillus phage CampHawk [NCBI] · taxon 1406783

Uroviricota Caudoviricetes Herelleviridae Okubovirus Okubovirus camphawk

Host

Bacillus subtilis [NCBI] · taxon 1423

Bacillota Bacilli Caryophanales Bacillaceae Bacillus Bacillus subtilis

No CDS data available.

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)