Protein

View in Explore
Genbank accession
QBX24281.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MPETISAILVHKSMTKNEWESSDIILPQGQLVYESDTGHSKFGDGKNRYADLIYQGGPPGPQGPQGPTGKTGEQGPPGPTGRRGETGPQGPPGLQGPPGADGKMTFEQLTPEQKQQLKGDKGDRGPKGDIGPRGLTGPQGPKGEPGINGMDGPRGATGPRGPQGPAGDPASIPDDVVRRGELSAYLLRSEYKAKGTGSGLSYKVVTQSEYDELYDYNDNELILVTEG
Physico‐chemical
properties
protein length:227 AA
molecular weight: 23791,95650 Da
isoelectric point:5,07091
aromaticity:0,05286
hydropathy:-0,96432

Domains

Domains [InterPro]
SSF69349
STR
8–227
SSF69349
PTHR24637
Unmapped
55–169
PTHR24637
IPR008160
STR
57–103
IPR008160 IPR008160
G3DSA:1.20.5.320
STR
75–121
G3DSA:1.20.5.320
QBX24281.1
1 227
Architecture
STR
STR 8-227
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan182
[NCBI] 		2548030 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus equi CECT_5772
[NCBI] 		254358 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus equi

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX24281.1 [NCBI]
Genbank nucleotide accession
MK448865.1 [NCBI]
CDS location
range 24924 -> 25607
strand +
CDS
ATGCCAGAGACTATATCAGCTATACTTGTGCATAAAAGCATGACAAAAAACGAGTGGGAGTCTAGTGACATCATTTTGCCACAAGGCCAGCTCGTCTATGAGTCTGACACAGGCCATAGTAAATTTGGCGACGGTAAAAATAGATATGCAGATTTAATCTATCAAGGTGGACCACCTGGACCACAAGGTCCCCAAGGACCAACAGGTAAAACAGGAGAGCAGGGCCCACCAGGCCCTACCGGTCGACGTGGGGAAACAGGCCCACAGGGTCCTCCCGGACTCCAAGGTCCACCGGGTGCTGACGGTAAAATGACTTTTGAGCAATTGACGCCAGAGCAAAAGCAACAACTAAAAGGCGACAAAGGCGACCGCGGCCCTAAAGGGGACATTGGTCCTAGAGGGCTAACGGGCCCGCAAGGCCCTAAAGGAGAGCCAGGGATAAATGGTATGGACGGTCCAAGAGGTGCAACAGGTCCCCGAGGACCGCAAGGCCCAGCTGGTGATCCGGCAAGCATACCCGACGATGTTGTCAGACGTGGTGAGCTATCGGCTTATCTGCTGCGGTCGGAATACAAAGCCAAAGGCACAGGATCTGGCCTAAGCTACAAAGTTGTCACTCAATCAGAGTATGACGAGTTATATGACTACAATGACAATGAGTTAATCCTCGTGACGGAGGGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1bc48e879c5e34498f4494bf62a001826fbebd5a64457b3e3d12ee2c1ae8384b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7835
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank