Phage RBP Database

Genbank accession

LC645417.1_CDS_[44505..46292] [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,90

Seq2Symm

C3 confidence 0,911

C3	0,911
C1	0,449
C6	0,007

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MTMDPGEYAVSVTVKGKTAVYGRVRIEGTESTVTLNMLLRRSLVEVSIPGELLTDFRQIQNNVADDLATIRRLNEDTATKNTQATQSKESAAASAKSASDSAKTATSRAAEAGQKATDATEAATRAVTAAGNAEESSTRAGESEKAAGADAEKARQHAEKARLAQESAGEILKRAEAATVSAEEARRMAENARGPRGPQGETGPKGDVGPKGETGPVGPQGPAGPKGERGDVGAQGAVGPAGPRGEKGEQGERGPQGIPGLKGDTGERGPKGDQGDMGPKGEKGDPGGPAGPQGPKGERGEAGPQGPMGARGERGETGPRGEPGPAGPRGERGEAGPQGPRGEPGPAGSAANVADATTAQKGIVQLSSATDSDDETKAATPKAVKAAMDVANEAKTKAEEAAAGGGVPGPKGDKGDTGPAGPAGPKGDKGERGDTGPVGATGERGPAGDAGPAGPQGPKGDRGERGETGLTGNAGPQGPKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGETQIRFRLGPGNIIETNSNGWFPDTDGALITGLTFLDPKDATQVQGLFRHLQVRFGDGPWQDVKGLDEVGSDTGRTGE

Physico‐chemical properties

protein length:	595 AA
molecular weight:	59025,53870 Da
isoelectric point:	5,19158
aromaticity:	0,01681
hydropathy:	-0,88000

Domain architecture

LC645417.1_CDS_[44505..46292]

1 595 aa

RBD 525–584 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR009640
RBD

IPR009640

LC645417.1_CDS_[44505..46292]

1595 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_2166
ATT

DC_2166 DC_2293 DC_0791

LC645417.1_CDS_[44505..46292]

1595 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR009640	RBD	DC_0593	525	584	InterPro cluster	Bacteriophage 933W, L0121, tail fibre, C-terminal	C-terminal	Low	Positional only	120 proteins / 125 hits

Proteins with similar domain architecture

Phage

Stx2a-converting phage Stx2_110509 [NCBI] · taxon 2864054

Uroviricota Caudoviricetes Oslovirus Oslovirus Lyz12581Vzw

Host No host information

Genbank protein accession

LC645417.1_CDS_[44505..46292] [NCBI]

Genbank nucleotide accession

LC645417.1 [NCBI]

CDS location

range 44505 -> 46292
strand +

CDS

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)