Protein

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Genbank accession
XHB37287.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,79
Seq2Symm
C3 confidence 0,993
C3 0,993
C1 0,008
C2 0,004
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MSTTAPYQFSLSGTEIEKLLKSITEKLDKSAIDKTMEGTSVPSTPTVKAALNEVLKTVTGVDLRKAIQDAPDCNVFTDNYKTLLERGGFLFVGAPADIPKRNAISTTTFQGGETILLQSNEFGVPTVQYWNGTSKKWDDVDEAKAHSFEKTFNGTSKQELIKLPKTKFSIYTFKVMAKTNTNIHMMDLHVGLNYSGNTAWMTGTNDFYGSGKLFTPTVDYDGTNMTLSLTPKASTINVRCEVIAAY
Physico‐chemical
properties
protein length:246 AA
molecular weight: 27045,39240 Da
isoelectric point:6,83503
aromaticity:0,09350
hydropathy:-0,31341

Taxonomy

Phage
Vibrio phage vB_VpaS_SD25 [NCBI] · taxon 3326590
Uroviricota Caudoviricetes Pantevenvirales Ackermannviridae Vibrio phage vB_VpaS_SD25
Host
Vibrio parahaemolyticus [NCBI] · taxon 670
Pseudomonadota Gammaproteobacteria Vibrionales Vibrionaceae Vibrio Vibrio parahaemolyticus

Coding sequence (CDS)

Genbank protein accession
XHB37287.1 [NCBI]
Genbank nucleotide accession
PQ249004.1 [NCBI]
CDS location
range 66514 -> 67254
strand +
CDS
ATGTCGACCACAGCACCATATCAATTCAGTCTGTCAGGTACAGAAATTGAAAAACTGTTAAAGTCAATCACTGAAAAGTTGGATAAATCAGCTATTGACAAGACGATGGAAGGTACTAGTGTTCCTTCAACACCTACAGTTAAAGCTGCACTCAACGAAGTATTGAAAACTGTAACAGGTGTTGACCTTCGTAAAGCTATCCAAGATGCGCCAGACTGTAACGTTTTCACTGATAACTACAAGACATTGCTTGAACGTGGTGGATTCTTATTTGTTGGTGCACCTGCAGATATTCCCAAACGTAATGCTATCAGTACGACAACTTTCCAAGGTGGTGAAACCATTTTACTCCAAAGTAATGAATTTGGAGTTCCGACTGTTCAATATTGGAATGGTACATCTAAGAAATGGGATGATGTGGATGAGGCTAAAGCTCATAGTTTTGAGAAGACTTTTAACGGTACGTCGAAACAGGAATTGATCAAGTTACCTAAAACCAAGTTCTCGATCTATACATTTAAAGTAATGGCAAAAACCAACACTAACATCCATATGATGGACTTACATGTTGGTTTGAATTATAGTGGTAATACTGCCTGGATGACAGGTACTAATGACTTTTATGGTTCGGGCAAGCTGTTTACACCAACCGTTGATTATGATGGTACTAACATGACGTTAAGTTTAACACCAAAAGCTAGTACCATCAACGTACGATGTGAGGTTATCGCAGCTTATTAA

Genome Context

Tertiary structure

XHB37287.1
ESMFold structure
Source ESMFold
pLDDT 71.6
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Genomic analysis of Vibrio parahaemolyticus phages Li,X., Chen,D. and Li,Y. 2023-06 — GenBank