Protein

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Genbank accession
YP_009293237.1 [GenBank]
Protein name
putative virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MENWLVAHAVDNAWQRPNLDRALIIEPYRITPKTGATGFVRNGPVSVSLPDAGWWHAYVVDKLHMNWGNLNIPPNRWKRVSACVNAFSTFMQLYNENGRTFPVTNAFVMRRDTGEILLAIPQTDRYKWLDTDDIYWRIFPGYTGTVVAKQVHPTFVEFFETPNANKIKDAIDRYNSLVGQNNGYVSFWVNGSLIINPTPADISTWDDVEIVVDGRGIRTVDFRCGDLPTFQSSLDGKRKYLLHFPKTADMVWIFNNDVEIQILNGREGRYYHRHRHLAIRQVTFNDISIPTERLSQLRNAFSKPISDLDDVVIRVVIREDYLAVAPLFNASHIHDLYKMPDSDIVAAMVGANATVPEWTAKVLENAAFNKVAAAKMSNITRDLTTEAYGYNAVTRYAADTPQKLMLDNGKWTATLPDLLASRSVVYEYDSTGKLLGCYPNRNAAVYTAKNVTARYIEGIAGDVDTAMNIMDNAPDFSISEGENVALWVRKVVSGVGTNEYTEAVEGTDYKREGNAIRWSVDRARRWPTVVRDDRHLFFSQTVNVKEGQLRIPILGRSNSEPIRTLWTPMETVEVWLNKRPLVFGIDYVVIWPEIVIVCKVWASDADENVVDVRARGVTGKLHVPKTGFVSSGLLSNNSHFDVRDDKVIRIVAGGRILTRNEVVFREDNTVGTDVVPDGFPFSVDDPTVPLRSLITGDTYALRDVSRDIDARTEDYLSAWYPTPPPVNPVPLKSWYHLYSPLLNKVLWDYKQGYLHLVEDDPEYRISTSQLDIVMEGYLDLLNFDPAFIGYDKAFVRVHPHSQYQVVEVDELGFAFMDRVNQRYLKGEVQLNQYLKIKGSKA
Physico‐chemical
properties
protein length:841 AA
molecular weight: 95570,13560 Da
isoelectric point:5,86024
aromaticity:0,10939
hydropathy:-0,27337

Domains

Domains [InterPro]
IPR055617
STR
2–837
IPR055617
YP_009293237.1
1 841
Architecture
STR
STR 2-837 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009293237.1
1 841
Domain Start End Length (AA) Confidence
N-terminal 1 354 354 0,7446
Central domain 355 830 477 0,2159
C-terminal 831 841 10 0,5098
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-354
Central
355-830
C-terminal
831-841

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage vB_EamM_Huxley
[NCBI] 		1883373 Uroviricota > Caudoviricetes > Chimalliviridae > Machinavirus machina >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009293237.1 [NCBI]
Genbank nucleotide accession
NC_031127 [NCBI]
CDS location
range 228499 -> 231024
strand +
CDS
ATGGAGAACTGGCTGGTCGCCCACGCGGTTGACAACGCTTGGCAGCGTCCGAACCTTGATCGGGCACTGATTATTGAACCGTATCGTATCACGCCAAAAACCGGCGCGACCGGCTTTGTCCGTAACGGGCCTGTGTCTGTATCTTTACCCGACGCAGGTTGGTGGCACGCATACGTGGTGGATAAACTCCACATGAACTGGGGGAACCTCAATATTCCTCCGAACCGTTGGAAGCGAGTATCTGCCTGTGTGAATGCGTTCAGTACCTTCATGCAGCTGTACAACGAGAATGGAAGAACATTCCCGGTGACGAATGCTTTTGTCATGCGTCGCGATACCGGGGAAATCCTGTTAGCGATTCCGCAGACCGACCGTTACAAATGGCTGGATACCGACGACATTTACTGGCGTATCTTCCCCGGTTACACTGGTACGGTGGTGGCGAAACAAGTACACCCGACGTTTGTCGAATTCTTTGAAACGCCGAATGCCAACAAAATCAAAGATGCAATAGACCGCTACAACTCACTGGTCGGCCAGAACAACGGCTATGTGAGTTTCTGGGTCAACGGCTCGCTGATTATCAACCCGACTCCGGCCGACATTTCGACGTGGGACGATGTTGAGATTGTGGTAGATGGGCGTGGGATTCGCACGGTAGATTTCCGTTGTGGGGATTTACCGACGTTCCAGTCGTCGTTGGATGGGAAACGTAAATACCTGCTCCACTTCCCGAAAACAGCGGACATGGTGTGGATTTTCAACAACGACGTTGAGATTCAGATCCTGAACGGACGCGAGGGTCGTTACTACCACCGTCATCGTCATCTGGCCATTCGTCAGGTTACCTTCAACGACATCAGTATTCCAACAGAACGGCTGAGCCAGTTGCGTAACGCCTTCAGCAAACCGATTAGCGATTTGGATGACGTGGTTATCCGTGTGGTTATCCGTGAAGACTACCTTGCAGTGGCACCGCTGTTCAACGCCAGCCATATCCACGACCTGTATAAGATGCCAGACAGTGACATCGTTGCAGCGATGGTTGGGGCTAACGCTACCGTTCCTGAGTGGACAGCGAAGGTGTTGGAAAATGCCGCCTTTAACAAGGTGGCCGCAGCGAAGATGTCAAACATCACTCGCGATTTGACCACGGAAGCTTACGGGTATAATGCAGTAACGCGTTACGCCGCTGACACGCCACAGAAGTTGATGTTGGATAACGGGAAATGGACAGCAACACTACCTGACCTGTTAGCGTCACGGTCAGTGGTTTACGAATACGACTCGACTGGAAAGCTGCTCGGTTGTTACCCGAACCGTAACGCGGCAGTCTACACGGCGAAGAACGTCACTGCACGTTACATCGAAGGGATTGCAGGCGATGTCGATACGGCGATGAACATCATGGACAACGCGCCCGATTTCTCCATCTCAGAAGGGGAGAACGTTGCGCTATGGGTTCGTAAGGTGGTCAGTGGTGTCGGCACCAATGAATACACCGAAGCGGTAGAAGGGACGGACTACAAGCGGGAGGGTAACGCCATCCGGTGGAGCGTTGACCGTGCACGCCGTTGGCCAACCGTCGTTCGTGATGACCGTCATTTGTTCTTCAGCCAGACCGTGAACGTCAAAGAAGGACAACTGCGTATCCCGATTCTGGGACGTTCGAACAGCGAACCGATTCGTACGTTGTGGACACCGATGGAAACCGTGGAGGTCTGGTTAAACAAACGACCATTGGTCTTTGGGATTGACTACGTCGTTATCTGGCCAGAGATTGTCATCGTGTGTAAAGTCTGGGCCAGTGACGCTGACGAAAACGTAGTGGATGTCCGTGCGCGTGGCGTAACCGGTAAACTGCATGTGCCGAAGACCGGGTTTGTTTCGAGCGGATTACTGTCTAACAACAGCCACTTCGATGTGCGTGATGACAAGGTCATTCGTATCGTTGCCGGGGGACGTATCCTGACCCGCAATGAGGTGGTCTTCCGTGAAGACAACACGGTGGGTACCGATGTAGTGCCGGACGGCTTCCCCTTCTCAGTGGATGACCCGACGGTGCCACTACGGTCACTTATCACCGGGGACACGTATGCGTTACGCGATGTATCTCGTGACATCGATGCGCGTACCGAGGATTATCTGTCGGCTTGGTATCCAACCCCGCCACCGGTCAATCCGGTACCGTTGAAAAGCTGGTATCATCTCTACAGCCCACTGTTGAACAAAGTGCTGTGGGATTACAAGCAAGGGTACCTCCATTTGGTAGAAGACGATCCTGAATACCGGATTTCGACTTCACAGCTGGACATCGTCATGGAGGGTTATCTTGACCTGCTGAACTTTGACCCGGCATTCATTGGCTATGATAAAGCCTTTGTGCGTGTGCATCCGCATTCGCAATACCAGGTTGTAGAGGTTGATGAATTGGGCTTTGCTTTCATGGACCGTGTGAATCAGCGGTATCTGAAAGGTGAGGTGCAACTTAACCAGTATCTGAAAATCAAAGGTTCTAAAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0f87e4ec46ddf65dbee97b0be8a1a05c41971f464037b20d618d05362e31e98d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3068
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50