Protein

View in Explore
Genbank accession
YP_009293237.1 [GenBank]
Protein name
putative virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Seq2Symm
C1 confidence 0,460
C1 0,460
C2 0,224
C3 0,045
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MENWLVAHAVDNAWQRPNLDRALIIEPYRITPKTGATGFVRNGPVSVSLPDAGWWHAYVVDKLHMNWGNLNIPPNRWKRVSACVNAFSTFMQLYNENGRTFPVTNAFVMRRDTGEILLAIPQTDRYKWLDTDDIYWRIFPGYTGTVVAKQVHPTFVEFFETPNANKIKDAIDRYNSLVGQNNGYVSFWVNGSLIINPTPADISTWDDVEIVVDGRGIRTVDFRCGDLPTFQSSLDGKRKYLLHFPKTADMVWIFNNDVEIQILNGREGRYYHRHRHLAIRQVTFNDISIPTERLSQLRNAFSKPISDLDDVVIRVVIREDYLAVAPLFNASHIHDLYKMPDSDIVAAMVGANATVPEWTAKVLENAAFNKVAAAKMSNITRDLTTEAYGYNAVTRYAADTPQKLMLDNGKWTATLPDLLASRSVVYEYDSTGKLLGCYPNRNAAVYTAKNVTARYIEGIAGDVDTAMNIMDNAPDFSISEGENVALWVRKVVSGVGTNEYTEAVEGTDYKREGNAIRWSVDRARRWPTVVRDDRHLFFSQTVNVKEGQLRIPILGRSNSEPIRTLWTPMETVEVWLNKRPLVFGIDYVVIWPEIVIVCKVWASDADENVVDVRARGVTGKLHVPKTGFVSSGLLSNNSHFDVRDDKVIRIVAGGRILTRNEVVFREDNTVGTDVVPDGFPFSVDDPTVPLRSLITGDTYALRDVSRDIDARTEDYLSAWYPTPPPVNPVPLKSWYHLYSPLLNKVLWDYKQGYLHLVEDDPEYRISTSQLDIVMEGYLDLLNFDPAFIGYDKAFVRVHPHSQYQVVEVDELGFAFMDRVNQRYLKGEVQLNQYLKIKGSKA
Physico‐chemical
properties
protein length:841 AA
molecular weight: 95570,13560 Da
isoelectric point:5,86024
aromaticity:0,10939
hydropathy:-0,27337

Domains

View on InterPro
Domain architecture
YP_009293237.1
1 841 aa
STR 2–837 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_009293237.1
1 841 aa
Domain Start End Length (AA) Confidence
N-terminal 1 354 354 0,7446
Central domain 355 830 477 0,2159
C-terminal 831 841 10 0,5098
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Erwinia phage vB_EamM_Huxley [NCBI] · taxon 1883373
Uroviricota Caudoviricetes Chimalliviridae Machinavirus Machinavirus machina
Host
Erwinia amylovora [NCBI] · taxon 552
Pseudomonadota Gammaproteobacteria Enterobacterales Erwiniaceae Erwinia Erwinia amylovora

Coding sequence (CDS)

Genbank protein accession
YP_009293237.1 [NCBI]
Genbank nucleotide accession
NC_031127 [NCBI]
CDS location
range 228499 -> 231024
strand +
CDS
ATGGAGAACTGGCTGGTCGCCCACGCGGTTGACAACGCTTGGCAGCGTCCGAACCTTGATCGGGCACTGATTATTGAACCGTATCGTATCACGCCAAAAACCGGCGCGACCGGCTTTGTCCGTAACGGGCCTGTGTCTGTATCTTTACCCGACGCAGGTTGGTGGCACGCATACGTGGTGGATAAACTCCACATGAACTGGGGGAACCTCAATATTCCTCCGAACCGTTGGAAGCGAGTATCTGCCTGTGTGAATGCGTTCAGTACCTTCATGCAGCTGTACAACGAGAATGGAAGAACATTCCCGGTGACGAATGCTTTTGTCATGCGTCGCGATACCGGGGAAATCCTGTTAGCGATTCCGCAGACCGACCGTTACAAATGGCTGGATACCGACGACATTTACTGGCGTATCTTCCCCGGTTACACTGGTACGGTGGTGGCGAAACAAGTACACCCGACGTTTGTCGAATTCTTTGAAACGCCGAATGCCAACAAAATCAAAGATGCAATAGACCGCTACAACTCACTGGTCGGCCAGAACAACGGCTATGTGAGTTTCTGGGTCAACGGCTCGCTGATTATCAACCCGACTCCGGCCGACATTTCGACGTGGGACGATGTTGAGATTGTGGTAGATGGGCGTGGGATTCGCACGGTAGATTTCCGTTGTGGGGATTTACCGACGTTCCAGTCGTCGTTGGATGGGAAACGTAAATACCTGCTCCACTTCCCGAAAACAGCGGACATGGTGTGGATTTTCAACAACGACGTTGAGATTCAGATCCTGAACGGACGCGAGGGTCGTTACTACCACCGTCATCGTCATCTGGCCATTCGTCAGGTTACCTTCAACGACATCAGTATTCCAACAGAACGGCTGAGCCAGTTGCGTAACGCCTTCAGCAAACCGATTAGCGATTTGGATGACGTGGTTATCCGTGTGGTTATCCGTGAAGACTACCTTGCAGTGGCACCGCTGTTCAACGCCAGCCATATCCACGACCTGTATAAGATGCCAGACAGTGACATCGTTGCAGCGATGGTTGGGGCTAACGCTACCGTTCCTGAGTGGACAGCGAAGGTGTTGGAAAATGCCGCCTTTAACAAGGTGGCCGCAGCGAAGATGTCAAACATCACTCGCGATTTGACCACGGAAGCTTACGGGTATAATGCAGTAACGCGTTACGCCGCTGACACGCCACAGAAGTTGATGTTGGATAACGGGAAATGGACAGCAACACTACCTGACCTGTTAGCGTCACGGTCAGTGGTTTACGAATACGACTCGACTGGAAAGCTGCTCGGTTGTTACCCGAACCGTAACGCGGCAGTCTACACGGCGAAGAACGTCACTGCACGTTACATCGAAGGGATTGCAGGCGATGTCGATACGGCGATGAACATCATGGACAACGCGCCCGATTTCTCCATCTCAGAAGGGGAGAACGTTGCGCTATGGGTTCGTAAGGTGGTCAGTGGTGTCGGCACCAATGAATACACCGAAGCGGTAGAAGGGACGGACTACAAGCGGGAGGGTAACGCCATCCGGTGGAGCGTTGACCGTGCACGCCGTTGGCCAACCGTCGTTCGTGATGACCGTCATTTGTTCTTCAGCCAGACCGTGAACGTCAAAGAAGGACAACTGCGTATCCCGATTCTGGGACGTTCGAACAGCGAACCGATTCGTACGTTGTGGACACCGATGGAAACCGTGGAGGTCTGGTTAAACAAACGACCATTGGTCTTTGGGATTGACTACGTCGTTATCTGGCCAGAGATTGTCATCGTGTGTAAAGTCTGGGCCAGTGACGCTGACGAAAACGTAGTGGATGTCCGTGCGCGTGGCGTAACCGGTAAACTGCATGTGCCGAAGACCGGGTTTGTTTCGAGCGGATTACTGTCTAACAACAGCCACTTCGATGTGCGTGATGACAAGGTCATTCGTATCGTTGCCGGGGGACGTATCCTGACCCGCAATGAGGTGGTCTTCCGTGAAGACAACACGGTGGGTACCGATGTAGTGCCGGACGGCTTCCCCTTCTCAGTGGATGACCCGACGGTGCCACTACGGTCACTTATCACCGGGGACACGTATGCGTTACGCGATGTATCTCGTGACATCGATGCGCGTACCGAGGATTATCTGTCGGCTTGGTATCCAACCCCGCCACCGGTCAATCCGGTACCGTTGAAAAGCTGGTATCATCTCTACAGCCCACTGTTGAACAAAGTGCTGTGGGATTACAAGCAAGGGTACCTCCATTTGGTAGAAGACGATCCTGAATACCGGATTTCGACTTCACAGCTGGACATCGTCATGGAGGGTTATCTTGACCTGCTGAACTTTGACCCGGCATTCATTGGCTATGATAAAGCCTTTGTGCGTGTGCATCCGCATTCGCAATACCAGGTTGTAGAGGTTGATGAATTGGGCTTTGCTTTCATGGACCGTGTGAATCAGCGGTATCTGAAAGGTGAGGTGCAACTTAACCAGTATCTGAAAATCAAAGGTTCTAAAGCATGA

Genome Context

Tertiary structure

YP_009293237.1
ESMFold structure
Source ESMFold
pLDDT 30.7
Oligomeric state monomer
Download structure