Protein

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Genbank accession
YP_007001760.1 [GenBank]
Protein name
sericin 1 precursor-like protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,49
Seq2Symm
C3 confidence 0,991
C3 0,991
C1 0,029
C5 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MSQINTDAIRNQAGEGQGIDIANGGNISFNTDTLYVDATNDRVGFGTTLPQAKLHMIGGFGLNANTAPIIEGINIVTDSINGSPNIRVDTDGPSHIFTTASTGNFTINIGTGTNAGTDLSSVMDVGQYISVTAIVSLGASSGFCNTINLGGAANTTYWVGGEVPDEVGDTSGYDIYYIQIHRNAASTYYVLAGKGHYSS
Physico‐chemical
properties
protein length:199 AA
molecular weight: 20626,34030 Da
isoelectric point:4,30921
aromaticity:0,08040
hydropathy:-0,06533

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_007001760.1
1 199 aa
Domain Start End Length (AA) Confidence
N-terminal 1 18 18 0,6378
Central domain 19 188 171 0,0209
C-terminal 189 199 10 0,9977
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Synechococcus phage S-MbCM6 [NCBI] · taxon 3126011
Uroviricota Caudoviricetes Pantevenvirales Kyanoviridae Namakavirus Namakavirus smbcm6
Host No host information

Coding sequence (CDS)

Genbank protein accession
YP_007001760.1 [NCBI]
Genbank nucleotide accession
NC_019444 [NCBI]
CDS location
range 29356 -> 29955
strand +
CDS
ATGTCACAAATAAATACAGACGCAATTAGAAATCAAGCAGGAGAGGGTCAAGGTATTGATATTGCCAATGGTGGTAATATTTCATTTAATACTGATACTCTTTACGTTGATGCTACAAACGATCGCGTTGGGTTTGGTACTACATTACCCCAAGCAAAGTTGCACATGATTGGTGGATTTGGTCTAAATGCCAATACTGCTCCTATTATTGAAGGTATCAATATTGTTACTGATTCTATTAATGGATCACCCAACATTAGAGTTGATACTGATGGTCCAAGTCATATATTTACAACTGCAAGCACAGGTAACTTTACAATTAATATTGGCACAGGAACAAATGCTGGCACAGATTTAAGTAGTGTTATGGATGTTGGGCAGTATATTTCTGTCACTGCAATTGTATCATTAGGTGCATCTTCAGGTTTCTGTAATACCATCAATCTGGGTGGTGCTGCTAATACTACATATTGGGTTGGTGGTGAAGTACCTGATGAAGTAGGTGATACATCTGGATATGACATATATTATATTCAGATACATAGAAATGCTGCATCCACGTATTACGTCCTTGCTGGCAAGGGTCACTACTCTTCATAA

Genome Context

Tertiary structure

YP_007001760.1
ESMFold structure
Source ESMFold
pLDDT 73.0
Oligomeric state monomer
Download structure