Protein

View in Explore
Genbank accession
QBI77312.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,63
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MGADVQQHLTGRKGGSSKPKQPSIARDSLQSVATAKLLLAVGEGEFAEGPSDQDIYLDNTPLMDASGNVNFPNVKWEWRSGSVDQDYIPGIPSVENETTVNVELRSDTPWVRSVTNTQLSAVRLRFAWPALQKQESSGDVNGYRIEYAVDVSTDGGAYQQVLLDAVDGKTTSRYERSQRIDLPAATTGWQVRVRRITPNQNSSLIADTMLIAGLTEVIDAKLRYPNTALLYIEFSAEQFSNIPAVTVECKARKVQVPTTYDPELRTYTGVWDGSFKSAWTNNPAWITYDISTNARFGLGKRIKPWMVDKWELYKIAQYCDQLVPDGKGGQEPRFLCDLNLQSRSQAWTLLRDIAAIYRGMSYWAQGQLVSQADMPRTADFDYVFTRANVIDGKMTYGAASARTRYSRALVSYDNPANNYDTDVTGYSDAPLLRRYGDNPVELSAIGCTRESEAQRRGKWAVLTSVQDRTITFATGMEGRIPLPGYIIPVADSLLAGREIGGRISAVAGRVVTLDRVTQAKAGDRLIINLPSGRAEGRTVQSVNGKAVTVTAAYSEAPEPELCWALDADDLAVQLYRVMSTKRDDNGQWTINGLQYEPSKFDHIDTGARLEERPISIIPVTTVQPPASVTLSSRWTIDQGLAVSTMTITWPAVEGAVAYDVEWKKDSGNWIRLPRAGTTSVDVTGIYAGGYLARVRAVSAFDITSVWKSSILTQLSGKTGAPPALAFLRTTSGPWKIGLEWGFPASGAADTAYTEIQQSVTPGGSEQNATALGLFAYPTDTHTLTSLAAGARLAFRGRLIDRTGNVGPWSAWVDGISSTDASEYNELITKEYVESALGEQFFAEIDQMQVDISGLQDQIDNLTDVLAYDPTKTYAKNDIVRVGNRLYQAKQAVPLNASPPNATYWADIGQSIETANGLAQQVATNTADITELDGKVEAAASSLDVLQAAARREPATGEKADALKGWDTIARAATEVTVRANEDEAQAKRTSLLEARTVTAEGRIATVESVVASNNAVTVQRLDQLSGQVASNASAISTEQTVRANADSALGQRMDTVSARTDTNEANIQTTSQAVTSLDGNVKALYSVKLQAHANGQKYAAGWQLGFDSGTSVTTMAFQADRFLWFNSSSGQTVAPVSIVGGQMFINNAMIQDGSITNAKIGNVIQSTALGANGEPLWKLDKGGAFTMNSATSGGFMRQTAEAIKVYDGNLVLRVQIGNLDV
Physico‐chemical
properties
protein length:1221 AA
molecular weight: 132206,15300 Da
isoelectric point:5,07546
aromaticity:0,07781
hydropathy:-0,28452

Domains

Domains [InterPro]
DC_0014
STR
2–1221
DC_0014
IPR053171
Unmapped
6–946
IPR053171 IPR015406
IPR055385
ATT
94–220
IPR055385 Coil
QBI77312.1
1 1221
Architecture
STR
ATT
STR
STR 2-93 | ATT 94-220 | STR 221-1221
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_Pae_CF53a
[NCBI] 		2563572 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBI77312.1 [NCBI]
Genbank nucleotide accession
MK510966.1 [NCBI]
CDS location
range 15047 -> 18712
strand +
CDS
ATGGGCGCCGATGTTCAGCAGCACCTCACTGGCCGCAAGGGCGGCAGCAGCAAGCCCAAGCAACCGTCGATCGCGCGCGACAGCCTGCAGTCGGTGGCCACCGCCAAGCTTCTGCTGGCGGTGGGCGAGGGCGAGTTCGCCGAGGGGCCGAGCGACCAGGACATCTACCTGGACAACACCCCGCTGATGGACGCCAGCGGCAACGTCAACTTCCCCAACGTGAAGTGGGAATGGCGCAGCGGCAGTGTCGATCAGGACTACATCCCCGGAATCCCCTCGGTGGAGAACGAGACCACGGTGAACGTGGAGCTGCGCAGCGACACCCCGTGGGTGCGTTCGGTGACCAACACCCAGTTGTCCGCCGTGCGCCTGCGCTTCGCCTGGCCGGCCCTGCAGAAGCAGGAGAGCAGTGGGGACGTGAACGGCTACCGGATCGAGTATGCCGTAGACGTCAGCACCGACGGCGGCGCCTACCAGCAGGTGTTGCTGGATGCTGTCGACGGCAAGACCACCAGCCGCTATGAGCGGAGCCAGCGCATCGACCTGCCGGCGGCGACCACTGGTTGGCAGGTACGCGTGCGCCGGATCACGCCGAACCAGAACAGCAGCTTGATCGCCGACACCATGCTGATCGCCGGTCTGACTGAGGTGATCGACGCGAAGCTGCGCTACCCAAACACAGCTCTGCTCTACATCGAGTTCAGCGCAGAGCAGTTCAGCAACATTCCGGCCGTCACCGTCGAGTGCAAGGCCCGCAAGGTCCAAGTGCCGACCACCTACGACCCGGAGCTGCGCACGTACACCGGCGTCTGGGATGGCAGTTTCAAGAGCGCCTGGACCAACAATCCCGCGTGGATCACCTACGACATCAGCACCAACGCGCGCTTCGGCCTGGGCAAGCGGATCAAGCCCTGGATGGTGGACAAGTGGGAGCTCTACAAGATCGCCCAGTATTGCGACCAATTGGTGCCAGACGGGAAGGGCGGCCAGGAGCCGCGCTTTCTGTGCGATCTGAACCTGCAGTCGCGCTCCCAGGCATGGACGCTGCTGCGGGATATCGCGGCGATCTATCGGGGGATGAGCTATTGGGCGCAGGGCCAGCTTGTGTCGCAGGCCGACATGCCGCGCACTGCCGACTTCGACTACGTGTTCACCCGGGCGAATGTGATTGACGGGAAGATGACCTACGGCGCCGCCTCGGCTCGCACCAGATATAGCCGCGCCCTGGTCAGCTACGACAACCCGGCGAACAACTACGACACCGACGTGACGGGCTATTCCGACGCGCCGTTGCTGCGTCGCTATGGCGACAACCCGGTTGAGCTGTCTGCCATCGGCTGTACGCGAGAGAGCGAGGCGCAGCGGCGCGGAAAGTGGGCGGTGCTGACCAGCGTGCAGGACCGCACCATCACCTTCGCCACCGGTATGGAAGGCCGGATTCCGCTGCCGGGCTACATCATCCCGGTGGCTGACTCTCTGCTGGCCGGCCGCGAGATTGGCGGCCGGATCTCGGCTGTTGCTGGCCGCGTGGTAACGCTCGATCGCGTCACTCAAGCCAAGGCCGGTGATCGCCTGATCATCAACCTGCCGAGCGGGCGCGCCGAGGGCCGGACGGTGCAGTCGGTCAACGGCAAGGCCGTCACCGTCACCGCGGCCTACTCGGAGGCGCCGGAGCCGGAACTGTGCTGGGCGCTCGACGCCGATGACCTGGCTGTCCAGCTCTATCGGGTGATGAGCACCAAGCGTGACGACAACGGCCAGTGGACCATCAACGGCCTGCAGTACGAGCCGAGCAAGTTCGACCACATCGATACCGGCGCACGGCTGGAGGAGCGCCCGATCAGCATCATCCCGGTCACCACCGTGCAGCCACCGGCCAGCGTCACGCTCTCGTCGCGCTGGACAATCGACCAGGGGCTGGCGGTGAGCACCATGACTATCACCTGGCCGGCAGTGGAGGGCGCCGTCGCCTACGACGTGGAATGGAAGAAGGACAGCGGCAACTGGATCCGCCTGCCGCGTGCCGGCACGACCAGCGTCGATGTGACCGGCATCTACGCAGGTGGCTATCTGGCGCGAGTGCGTGCGGTGTCGGCCTTCGACATCACGTCGGTCTGGAAGAGTTCGATCCTGACCCAGCTCAGCGGTAAGACCGGCGCGCCGCCGGCGCTGGCGTTCCTGCGTACCACCAGCGGACCGTGGAAGATCGGCCTGGAGTGGGGATTCCCGGCCAGTGGCGCGGCGGACACCGCCTACACCGAGATCCAACAGTCGGTTACCCCAGGCGGCAGCGAACAGAACGCAACTGCCCTGGGCTTGTTTGCATACCCGACCGATACCCACACGCTGACCTCGCTGGCGGCCGGCGCTCGCCTGGCCTTCCGCGGGCGGCTGATCGACAGGACCGGCAACGTCGGCCCCTGGTCGGCCTGGGTCGACGGCATAAGCTCGACGGATGCGAGCGAGTACAACGAGCTGATCACCAAGGAGTACGTCGAGTCCGCGCTGGGCGAGCAGTTCTTCGCCGAAATCGATCAGATGCAGGTCGATATCAGTGGCCTGCAGGACCAGATCGACAATCTGACCGATGTGCTGGCCTACGACCCGACGAAGACCTACGCGAAGAACGATATCGTGCGGGTCGGCAACCGGCTGTATCAAGCGAAGCAGGCGGTGCCGCTCAACGCCTCGCCGCCGAACGCGACCTACTGGGCCGACATCGGACAGTCGATCGAGACGGCCAACGGCCTGGCCCAGCAGGTGGCCACCAACACCGCGGATATCACCGAGCTCGACGGTAAGGTCGAAGCGGCGGCTTCGAGCCTGGATGTTCTGCAGGCTGCCGCCCGCCGGGAGCCGGCGACCGGAGAGAAGGCCGATGCGCTGAAGGGCTGGGACACCATTGCTCGAGCCGCCACCGAAGTCACCGTGCGGGCGAACGAGGACGAAGCGCAGGCGAAGCGGACGAGCTTGCTTGAAGCGCGGACTGTGACGGCGGAGGGCAGGATCGCCACCGTGGAGTCGGTCGTTGCGTCGAACAATGCCGTGACCGTCCAGCGGCTGGATCAGCTATCCGGCCAGGTTGCGAGCAACGCCTCGGCGATCAGCACCGAACAGACCGTCCGCGCCAACGCGGACAGCGCCCTGGGGCAGCGGATGGATACCGTCAGTGCGCGCACCGATACCAACGAGGCGAACATCCAGACCACATCTCAAGCGGTTACCTCGCTGGATGGAAACGTCAAGGCGCTCTACAGCGTGAAGCTCCAGGCGCATGCCAATGGCCAGAAGTACGCCGCTGGCTGGCAACTGGGCTTCGACAGCGGTACGAGCGTGACGACCATGGCGTTCCAGGCTGATCGGTTCCTCTGGTTCAACAGTTCCAGCGGGCAGACCGTGGCGCCGGTCTCGATCGTCGGCGGCCAGATGTTCATCAACAACGCGATGATCCAGGACGGCTCGATCACCAACGCGAAGATCGGCAACGTGATTCAGTCGACCGCCCTCGGTGCCAACGGCGAGCCGCTGTGGAAGTTGGATAAGGGCGGCGCGTTCACAATGAACAGCGCAACGTCGGGAGGGTTTATGCGTCAGACGGCAGAGGCAATAAAAGTGTATGACGGAAACTTAGTGCTTCGAGTCCAGATCGGGAATCTTGATGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5653441109625fdef143f18975985ec7f568eeb4da6bd8b5c0f523d2c8f7cc72
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7740
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Mobilizing temperate bacteriophage communities and resolving individual phage genomes from cystic fibrosis and bronchiectasis Pseudomonas aeruginosa isolates Tariq,M.A., Everest,F.L.C., Cowley,L.A., Wright,R., Holt,G.S., Ingram,H., Duignan,L.A.M., Lanyon,C.V., Perry,A., Perry,J.D., Bourke,S., Brockhurst,M.A., Bridge,S.H., Soyza,A.D. and Smith,D.L. 2019 — GenBank