Protein

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Genbank accession
ADP00077.1 [GenBank]
Protein name
tail tube protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MASVTQKIPNYVLGISQQPDEKKFPGQVNDLVNGLPDVVEQLTKRPGSHLISAISPSTAANSKWFTIYTRDDESYIGQVAADGGVKIFRCSDGVEIPVDYANIAGSGVATYLDNTALSDEKSSDIQALTINETTFFVNRRKTVEMKRDAASKSPTQPFEAYIQLDSIAYGKQYALDIYDPSDNSTVSYTRATSIAADEDVSLDGTSSTGANQPGNGDCDGAGREYVTVSTGTSIHSTSPPNASAGGKTNLRYEMDARCTPQPDDDHTDSEAQDNYHDTYQTYAKLQFGGEGWTTNDTHQHTSEKGLTTTVKITNHVTITTRANIAMVRPEATSSNAEEHVSADGILGELKATLDAISGTGITCTKVGNGLHLYRATKFGVTTPEKTLMSITTSEVNTIADLPSTCRHGYVVRVVNSEENQDDYFLKFSAEGIAEDIDQTGTYARSSNTITVTAASHGLSNGDQIILDITSGGATDGFYTIANVTTNTFTVTDSASGTISAGETCSFTPARFGEGVWEEVVQPGKDIEIDNTTMPIALTRVLPGSFSINGGGSQTYSNGAFRFSYPDWYKRDCGDDITNPEPSFIGQTIQKMVFFRNRIALLSAENVILSRVNDFYNFWNKTAMAISNADPIDLQSSSTYPTKLYDAVEQAGGLVIFSASEQFLLSSGAEALLTPETAKISYVSSHAFNPDTSPIELGTTIGFLNSTAKNTRFFEMAAVSQREEPTIVEQSKSIYNLFPVNTSMMTGSVENQMVLFGVDSTLYTASNEVWGYKFYVSEGRRSQSAWFRWTLPNNLVYHSIIDDVYYAVLNTGSTFTFEKFDIKIKSDTLMIGDAPEDNRVHLDTKKTFASGDLTYNSATDVTTFTLGAGYYSTRNLSAYCITDSDDLGKSYDIPSSAITGTAPNQTVTLPGNWKTSTEAGASTSSVNTDVIIGYEYEFEVELPTIYMMRPEGDKMASETRGSLVIHRMNFDFGDVGVIDVTLKRKGRDDYTYTVESKEWDNILASTPAIASSYLHTIPVYDRNTNLTVQIKSNHPSPATIHSMNWEGDYSPKYYSRV
Physico‐chemical
properties
protein length:1056 AA
molecular weight: 115189,75000 Da
isoelectric point:4,69436
aromaticity:0,09470
hydropathy:-0,37491

Domains

Domains [InterPro]
IPR058003
TTP
1–189
IPR058003 DC_0173 IPR058003
DC_0173
ATT
1–258
DC_0173 IPR058003 IPR023366
ADP00077.1
1 1056
Architecture
ATT
ATT
STR
TTP
ATT 1-258 | ATT 291-465 | STR 466-511 | TTP 512-1054 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ADP00077.1
1 1056
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,7500
Central domain 143 342 201 0,6565
C-terminal 343 1056 713 0,4502
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-342
C-terminal
343-1056

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage NATL1A-7
[NCBI] 		445693 Uroviricota > Caudoviricetes > Autographivirales > Cheungvirus > Cheungvirus NATL1A7
Host Prochlorococcus marinus str. NATL1A
[NCBI] 		167555 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADP00077.1 [NCBI]
Genbank nucleotide accession
GU071102 [NCBI]
CDS location
range 1 -> 47741
strand -
CDS
ATGGCTAGTGTTACCCAGAAGATACCTAACTATGTGCTAGGTATCAGTCAACAACCAGATGAAAAGAAATTTCCAGGTCAAGTAAACGACCTTGTGAATGGCTTACCTGATGTTGTAGAACAATTAACTAAACGTCCTGGCAGTCATTTGATATCTGCTATATCTCCATCTACTGCTGCTAATTCAAAATGGTTTACTATTTATACAAGAGATGATGAATCTTATATTGGACAAGTTGCAGCTGATGGAGGTGTTAAAATATTTAGATGTAGTGATGGTGTTGAGATACCCGTGGACTATGCAAATATTGCTGGATCAGGTGTCGCAACTTACTTAGATAATACTGCATTATCAGATGAGAAGTCTTCAGATATACAGGCGTTAACAATTAACGAAACAACATTCTTTGTTAACAGACGTAAGACTGTTGAGATGAAAAGAGATGCAGCATCTAAATCTCCTACTCAACCATTTGAAGCTTACATACAACTTGATAGTATAGCTTACGGTAAACAGTATGCTTTAGATATATACGATCCTTCTGATAACTCAACAGTTTCTTATACACGTGCTACTTCGATAGCAGCTGATGAAGATGTGTCTCTTGATGGTACAAGTTCTACAGGAGCTAACCAACCAGGTAATGGAGACTGTGATGGAGCTGGTAGAGAATATGTAACAGTTAGTACAGGTACATCGATTCATAGTACATCACCTCCTAATGCAAGTGCAGGTGGTAAGACTAATCTTAGGTATGAGATGGATGCTAGATGCACCCCTCAACCTGACGATGATCATACTGATTCAGAAGCCCAAGATAATTATCACGACACATACCAAACTTATGCTAAATTACAATTTGGTGGAGAAGGTTGGACTACAAATGATACTCATCAACATACTTCTGAGAAGGGGCTTACTACTACTGTAAAGATTACTAACCATGTAACTATAACTACTAGAGCTAATATAGCAATGGTACGTCCAGAAGCTACATCCTCTAATGCTGAAGAACATGTATCAGCAGATGGTATATTAGGGGAACTTAAAGCTACATTAGATGCTATATCTGGTACAGGTATTACATGTACTAAAGTTGGTAACGGTTTACATTTATATCGGGCTACAAAATTTGGTGTAACAACACCTGAAAAAACCTTAATGAGTATTACTACAAGTGAAGTAAATACTATTGCTGATCTACCTAGTACATGCCGTCATGGTTATGTAGTACGTGTAGTAAATAGTGAAGAGAATCAAGATGATTACTTCCTTAAGTTTAGTGCTGAAGGTATAGCTGAAGATATAGATCAGACTGGTACCTACGCTAGATCTAGTAATACAATTACTGTAACAGCTGCTAGTCATGGTCTTTCAAATGGAGATCAAATCATATTAGATATAACCAGCGGTGGAGCAACAGACGGATTCTATACTATTGCTAACGTAACAACTAATACATTTACTGTTACAGATTCAGCTTCTGGAACTATCAGTGCAGGTGAAACTTGTTCGTTCACACCAGCTCGCTTCGGAGAGGGCGTGTGGGAAGAGGTAGTACAACCTGGTAAAGATATAGAGATAGATAATACAACGATGCCTATAGCCCTTACTAGGGTGCTTCCAGGCTCATTCTCAATTAATGGTGGTGGTTCTCAAACTTACTCTAATGGAGCTTTCAGATTCTCTTATCCTGATTGGTATAAACGAGACTGTGGTGATGACATTACAAACCCAGAACCTTCATTCATAGGCCAGACTATTCAAAAGATGGTATTCTTCCGTAATAGAATAGCCTTGTTAAGTGCTGAGAATGTTATCTTATCTAGAGTTAATGACTTCTATAATTTTTGGAACAAAACTGCAATGGCAATTTCTAATGCAGATCCAATTGATTTACAGTCTAGCTCTACATATCCAACCAAATTATATGATGCTGTTGAACAAGCTGGTGGTTTAGTTATCTTTAGTGCTAGTGAACAGTTCTTATTAAGTTCAGGTGCCGAGGCTCTCTTGACCCCTGAGACTGCTAAGATCAGTTATGTATCATCACACGCTTTTAACCCTGATACTAGTCCTATTGAGTTAGGTACTACTATAGGATTCTTAAATAGTACAGCTAAAAATACCCGTTTCTTTGAAATGGCAGCTGTGTCTCAAAGAGAAGAACCTACCATAGTAGAACAAAGTAAAAGTATATATAACCTATTTCCTGTTAATACCAGTATGATGACTGGTTCAGTAGAGAACCAAATGGTATTATTTGGTGTAGATAGTACATTATACACTGCATCTAATGAAGTATGGGGTTATAAATTTTATGTTTCAGAAGGTAGAAGATCTCAATCAGCTTGGTTTAGATGGACATTACCTAATAACTTAGTATATCATTCTATTATTGATGATGTATATTATGCAGTACTTAATACAGGTTCTACATTTACCTTTGAAAAATTTGACATAAAAATTAAATCAGACACATTAATGATAGGGGATGCTCCAGAAGATAATAGGGTACACTTAGATACTAAGAAAACCTTTGCATCTGGAGACTTAACATATAATAGTGCAACTGATGTAACAACGTTTACATTAGGAGCTGGTTATTATAGTACTAGAAACTTATCAGCATACTGTATAACAGATAGTGATGATCTAGGTAAGAGTTATGATATACCTTCCTCTGCTATTACTGGTACAGCACCTAACCAAACAGTTACCTTACCTGGTAATTGGAAGACTTCTACAGAAGCTGGTGCCTCTACAAGTTCAGTTAACACTGATGTTATAATAGGATATGAGTATGAATTTGAAGTTGAACTACCTACGATATACATGATGAGACCAGAGGGAGATAAAATGGCTTCCGAAACACGTGGGTCTCTTGTTATACATAGGATGAACTTTGACTTTGGAGATGTTGGTGTTATAGATGTTACATTAAAACGTAAAGGTAGAGATGATTATACATATACAGTTGAATCTAAAGAGTGGGATAACATACTAGCTAGTACACCTGCTATCGCAAGTAGCTACCTACATACCATACCAGTCTATGATAGAAACACAAACCTAACAGTACAAATTAAATCTAATCACCCTTCACCTGCCACTATACATTCAATGAATTGGGAGGGTGACTATTCACCTAAATACTATTCACGTGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7346a96b0b884e2ceacae62d281546595dbdec1f0b8dfdc71c136a9afee922e2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7636
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage NATL1A-7 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank