Protein

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Genbank accession
XCH40339.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,70
Protein sequence
MYPIPCFFLTLSGGGTEPLPPGSVKKIAFTRDQTTGIKRSMAILLTDGRLYAQGDNAWGECADGTVSPFYDHWNLAAQGVADVFGAGKAFVVKYNSGGWQFCGDLSQFTGSGGIYVTWTSFPSSITGTVALADLASVSGANGNTLWLMTNGRLYGSGTNSNGCLGANNTNIFSTPRSISASCLRAFSLNACVTYLNNVGTARVCGMTYSINGTTTTQTQSFIDVAVAPTTNVDTGITAPVYVKEWMSNESNSIAIGSYAADDNDNYLFCRNIVPGFTTSTYVKVSDFGPFTDFRVIDGGQSRFFIADNVLYGIGDVPRNLGLGTTDSTQVSTPTPVPVPTGKDWDLSKLTYIADMKGNTLTSGGTFGHWMVYDNNLYYTGFSYGFFNSNDTSYVFVNVPESSFEGTTADAITTGSIPYAIKGSKGQMTWTVEPANAEIYDISFTSSAPNIATVDSNGIMTFLEEGSFDITMTAKTGSGDDAKTLTDTSGGYVSIFSVTTDSVPAKQVGDVFVFMDKNSPDYTPGPNIIGMEFSPANVDTSFIDGEFTTTDPSVVEVSPDGYLTCIASGDCRCGVRLIYREGQVEAFDDSYVSVLEPTATIPPDGGGIIT
Physico‐chemical
properties
protein length:609 AA
molecular weight: 64658,02850 Da
isoelectric point:4,23692
aromaticity:0,11494
hydropathy:-0,04860

Domains

Domains [InterPro]
IPR009091
STR
11–210
IPR009091 DC_0179
IPR009091
STR
40–393
IPR009091 G3DSA:2.60.40.1080
DC_0918
STR
76–205
DC_0918 IPR003343 DC_1711
IPR008964
RBD
418–477
IPR008964
IPR003343
STR
420–483
IPR003343
XCH40339.1
1 609
Architecture
STR
RBD
STR 11-514 | RBD 515-603 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCH40339.1
1 609
Domain Start End Length (AA) Confidence
N-terminal 1 86 86 0,2157
Central domain 87 427 342 0,8577
C-terminal 428 609 181 0,0645
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-86
Central
87-427
C-terminal
428-609

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SEnST11_KE22
[NCBI] 		3161173 Uroviricota > Caudoviricetes > Vequintavirinae >
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCH40339.1 [NCBI]
Genbank nucleotide accession
PP856721 [NCBI]
CDS location
range 97789 -> 99618
strand -
CDS
ATGTATCCTATTCCTTGCTTTTTCCTGACTCTCTCAGGTGGCGGGACTGAACCACTACCACCAGGAAGTGTTAAGAAAATTGCATTCACAAGAGATCAGACCACAGGCATCAAGAGGTCTATGGCAATTTTGCTGACAGACGGAAGACTTTATGCTCAGGGTGACAACGCCTGGGGCGAGTGTGCGGATGGAACCGTGAGTCCATTTTACGATCACTGGAATCTTGCTGCTCAAGGTGTTGCTGATGTCTTTGGTGCTGGTAAGGCATTTGTTGTAAAATACAACAGCGGCGGTTGGCAGTTCTGTGGAGATCTGTCACAATTTACCGGAAGTGGTGGTATTTATGTCACATGGACAAGCTTCCCATCTTCCATCACAGGAACTGTAGCCCTTGCAGACCTCGCAAGTGTTTCTGGCGCGAACGGGAACACCTTGTGGCTCATGACTAATGGCAGATTGTATGGTAGTGGAACAAACTCCAACGGATGCTTGGGTGCAAACAACACCAACATCTTCTCAACACCACGTTCTATAAGTGCTTCTTGCCTGAGAGCTTTCAGCCTAAACGCTTGCGTTACTTATTTAAATAACGTAGGGACTGCTCGTGTCTGCGGGATGACATATAGCATCAACGGAACAACAACCACCCAGACACAAAGTTTTATAGATGTGGCTGTTGCTCCCACCACAAATGTAGATACAGGGATCACAGCCCCTGTTTATGTGAAAGAGTGGATGTCGAACGAGTCCAACAGCATTGCCATCGGTTCTTATGCAGCAGATGATAACGACAATTACCTGTTTTGTAGGAATATTGTACCTGGGTTTACAACATCTACATATGTGAAGGTAAGTGATTTTGGTCCTTTCACTGATTTTCGTGTTATAGATGGTGGTCAGTCAAGATTCTTCATCGCTGATAATGTGTTGTATGGTATCGGAGATGTGCCTAGAAACCTTGGTCTTGGAACTACTGATTCTACGCAAGTGTCCACCCCAACACCTGTTCCAGTTCCTACAGGGAAAGATTGGGACCTGAGTAAGCTTACTTATATTGCAGATATGAAGGGAAACACCCTTACAAGTGGTGGTACTTTCGGTCACTGGATGGTGTACGACAACAACCTTTACTATACAGGGTTTAGTTACGGATTCTTTAATTCAAACGACACCTCTTATGTGTTTGTAAACGTGCCGGAGTCATCGTTTGAAGGAACGACAGCAGATGCTATCACCACGGGTTCAATTCCATATGCAATAAAAGGGTCGAAGGGTCAGATGACTTGGACGGTAGAGCCTGCTAATGCGGAGATTTACGATATTTCGTTCACATCAAGTGCTCCTAATATCGCAACTGTCGATTCGAACGGGATCATGACATTCCTTGAAGAGGGTAGCTTTGACATCACAATGACTGCTAAAACAGGGTCGGGCGATGATGCAAAGACACTCACTGACACCTCTGGTGGTTATGTTTCCATCTTCTCGGTGACCACAGATTCCGTACCTGCAAAACAGGTCGGTGATGTTTTCGTGTTCATGGATAAGAACAGTCCAGACTACACACCCGGTCCAAACATTATCGGTATGGAGTTCTCTCCTGCGAATGTTGATACCAGCTTTATAGATGGGGAATTCACTACGACAGATCCAAGTGTTGTAGAGGTTAGTCCTGACGGATACCTGACCTGTATCGCATCAGGTGATTGCCGTTGTGGTGTGCGCCTTATCTACAGAGAGGGTCAAGTTGAAGCATTCGATGATTCATATGTCTCGGTTCTTGAACCTACAGCAACAATCCCACCAGACGGTGGTGGGATCATCACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
894a2b29643ecc03e5dd00048d5a4830bc4319ac5bfecbbdc6216e5298badd79
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7848
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50