Phage RBP Database

Genbank accession

XJP09063.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

Seq2Symm

H confidence 0,801

H	0,801
I	0,191
C1	0,002

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MGFLPPNFKLEQKMQNISGFGLSATVIASATFPTGFQVNAFADDASPIDTPDFELADTAMGLNGHGLNWSRPQMSEFTFNVIAGSDDDKNFEILFEANRIGLGKRSARDKISATVNYPDGSVESFSEGVMITGTIMPKISAAGRFETRAWRFRFQNKTKVEG

Physico‐chemical properties

protein length:	162 AA
molecular weight:	17728,72780 Da
isoelectric point:	5,17436
aromaticity:	0,11111
hydropathy:	-0,27284

Domain architecture

XJP09063.1

1 162 aa

STR 15–157 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR054440
STR

IPR054440

XJP09063.1

1162 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR054440	STR	DC_0220	15	157	InterPro cluster	Tail fiber protein gp32-like	Central	Low	Positional only	82 proteins / 82 hits

Proteins with similar domain architecture

Phage

Xylella phage MATE2 [NCBI] · taxon 3237932

Uroviricota Caudoviricetes Lindbergviridae Carpasinavirus Xylella phage MATE2

Host

Xylella fastidiosa [NCBI] · taxon 2371

Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Xylella Xylella fastidiosa

Genbank protein accession

XJP09063.1 [NCBI]

Genbank nucleotide accession

PP816325.1 [NCBI]

CDS location

range 14812 -> 15300
strand +

CDS

GTGGGGTTCCTGCCGCCCAATTTCAAACTGGAGCAAAAAATGCAAAACATTTCTGGATTCGGCCTTTCCGCTACCGTAATCGCGTCCGCGACATTCCCAACCGGCTTTCAGGTAAACGCCTTCGCTGACGACGCAAGCCCAATTGATACTCCTGATTTTGAGCTCGCAGATACTGCAATGGGCTTGAATGGCCACGGCCTTAACTGGTCTCGCCCTCAGATGAGCGAATTCACTTTCAATGTCATTGCTGGAAGTGATGACGACAAGAATTTTGAAATTCTTTTCGAGGCGAACCGAATTGGTCTTGGAAAGCGCTCTGCACGCGATAAGATCTCCGCCACAGTAAACTACCCTGACGGCAGCGTTGAATCCTTTTCAGAAGGCGTCATGATCACCGGCACGATCATGCCCAAGATCAGCGCGGCAGGTCGGTTTGAAACCCGTGCTTGGCGCTTTCGCTTCCAGAACAAGACGAAGGTTGAAGGTTAA

Title	Authors	Date	PMID	Source
Xylella phage MATE 2: a novel bacteriophage with potent lytic activity against Xylella fastidiosa subsp. pauca	Sabri,M., El Handi,K., Cara,O., De Stradis,A., Valentini,F. and Elbeaino,T.	2024	38863752	GenBank

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Literature