Protein

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UniProt accession
G8GDR2 [UniProt]
Protein name
Tail spike protein 1
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNPQFAQPKGSTSKESNKDSIARKFGCKKSEVVYAKAGQSLSGYKVIYDKLSQRAYALPPNIGAVTVTSLVDGILTHSGGTVDLGALAVLREEYVTLVENFTSGFTIRVKNEVVSDGVSLYRWNGAFPKTVAPGSTPATTGGVGLGAWVSVGDVSLRSELSKEDGFKYIGYSSVEGLRSIEPSTPNQQIMVNRYNDSDAGKSGAGAFYYDPNDTTSADDGTLVIVTTNGKRWKRINPHNDFAYLSGGRYGDFDNTEAMQRCVDGMVSGKIRPPVYINGTIRIDGTVNVNNLDTSVPEKFVSFIGGEIVANGQQYVFSSTEADNASGNIEFVGTNFSQKDTSKVTYIINGQKLIRVLFNGGTVNGLLVAKSNNWLQTLYLTGTKIIRSPQGYALDAGQWFDVRLSKVVFERGWDFARATATGQCVTYSSVTECCIEGSQNGVVIIGGVSGFTFADNTLELMTGQYLDIGASGDKSNSLVVTGNTAYLTADQKASASYFAYNLPAITQNGTSLVQANFTDGNLYSVYPGNQQLISLSGMCGAGKVFLNAANGPTHVRYSLQYGEIERTISALGRDVGVGDVNPQTEPAYYGNITWSTGSYIAKKNPTVVSRNITALGKLADCLLKGWVCQIGGSPGTWVEDLMIL
Physico‐chemical
properties
protein length:643 AA
molecular weight: 68849,35850 Da
isoelectric point:6,09009
aromaticity:0,09642
hydropathy:-0,16501

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–93
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 DC_1532
DC_0018
ATT
2–260
DC_0018
IPR040775
RBD
90–153
IPR040775
G8GDR2
1 643
Architecture
ATT
STR
ATT 1-260 | STR 261-643
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
G8GDR2
1 643
Domain Start End Length (AA) Confidence
N-terminal 1 254 254 0,9955
Central domain 255 571 318 0,9656
C-terminal 572 643 71 0,9612
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-254
Central
255-571
C-terminal
572-643

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella typhimurium phage PhiSH19
[NCBI] 		1108865 Uroviricota > Caudoviricetes > Pantevenvirales > Cvivirinae > Kuttervirus
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AER70268.1 [NCBI]
Genbank nucleotide accession
JN126049 [NCBI]
CDS location
range 120710 -> 122641
strand -
CDS
ATGAATCCGCAATTTGCTCAACCAAAAGGTTCTACTTCAAAAGAATCGAACAAAGATAGTATTGCCCGTAAATTTGGGTGTAAAAAGTCGGAAGTCGTTTATGCCAAAGCGGGACAGTCCTTGTCTGGTTATAAAGTGATCTACGATAAGTTGTCTCAACGTGCCTACGCTCTCCCTCCTAACATTGGTGCTGTAACGGTCACCAGTTTGGTCGACGGCATCCTCACGCACTCTGGAGGCACCGTAGATTTGGGTGCATTGGCTGTGTTAAGGGAAGAGTATGTTACTCTTGTTGAAAATTTTACTTCTGGATTTACGATTCGTGTCAAGAACGAAGTCGTGAGCGATGGGGTGAGTCTATATCGTTGGAATGGTGCATTCCCTAAAACCGTTGCTCCTGGTTCAACCCCAGCAACAACGGGTGGTGTTGGTTTAGGTGCGTGGGTTAGTGTTGGAGATGTTTCTCTACGTAGTGAACTTTCAAAAGAAGACGGCTTCAAATACATAGGGTACTCAAGCGTAGAAGGGCTTAGGTCGATTGAGCCATCGACACCAAACCAGCAGATAATGGTTAATCGCTATAATGATAGTGATGCTGGTAAATCTGGTGCTGGTGCTTTTTATTATGACCCTAACGACACAACATCTGCGGATGACGGTACATTGGTGATTGTGACCACCAATGGGAAAAGGTGGAAGCGTATAAATCCACATAACGATTTTGCTTATTTGTCAGGTGGTAGATACGGAGACTTCGACAATACAGAAGCTATGCAAAGATGTGTCGATGGGATGGTGTCAGGTAAAATACGACCACCAGTTTACATCAATGGCACTATCCGCATTGATGGAACAGTAAATGTAAACAACCTTGATACTTCTGTACCTGAAAAATTTGTGTCATTTATCGGTGGTGAGATAGTAGCAAATGGTCAACAATATGTATTCTCATCAACTGAAGCCGATAATGCTTCTGGTAATATTGAGTTTGTAGGCACTAACTTTTCGCAGAAGGATACATCAAAAGTTACATACATTATTAACGGTCAGAAGTTGATTCGTGTTCTGTTCAATGGGGGCACTGTAAATGGACTGTTAGTAGCTAAATCAAACAATTGGTTGCAAACTTTATACCTTACTGGCACAAAGATAATCCGCTCTCCTCAAGGCTATGCGCTTGATGCGGGGCAGTGGTTTGATGTCAGATTGTCAAAGGTTGTGTTTGAACGCGGTTGGGATTTCGCACGAGCAACAGCTACTGGGCAATGCGTAACATATTCGTCAGTCACTGAATGCTGCATTGAGGGTTCTCAAAACGGTGTAGTAATAATCGGTGGCGTGTCAGGATTTACTTTTGCAGACAATACACTTGAGCTTATGACGGGCCAGTACCTGGATATAGGTGCATCGGGTGATAAATCAAATTCGCTCGTCGTGACAGGCAATACCGCGTATCTGACTGCAGATCAAAAAGCGTCGGCGTCGTACTTTGCTTATAACCTACCCGCGATCACACAAAACGGGACATCCCTGGTGCAAGCGAATTTCACGGATGGCAACCTTTACAGCGTCTATCCAGGCAATCAGCAACTGATATCACTGTCTGGTATGTGCGGGGCCGGGAAAGTATTTCTTAATGCAGCGAACGGGCCAACCCATGTACGCTATAGTTTACAATATGGCGAAATAGAACGAACTATTTCTGCACTTGGTCGCGACGTGGGTGTTGGCGATGTCAACCCGCAAACAGAGCCTGCATACTACGGGAATATAACCTGGTCAACAGGCTCTTATATCGCTAAAAAAAATCCAACAGTGGTATCGCGTAACATTACCGCGCTTGGAAAGCTGGCTGATTGTCTGCTGAAGGGTTGGGTATGTCAGATTGGAGGTAGCCCAGGAACATGGGTTGAGGATTTGATGATATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
10d1e2ba6275d0d851afbfacd76320706524d37105658bc091f98c797105b7e0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7564
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
— — 22047448 PubMed