Protein

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Genbank accession
XYS96762.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 0,90
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,92
Seq2Symm
C3 confidence 0,998
C3 0,998
C1 0,007
D3 0,000
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MADYSQLPIENIWSTGGDMVAPTPAQQQGGWGIQSVPRQWWNWKWNLHDTNLAYLLQKGIPEWTSTQEYIANKSFCTRGGFVYKAVRTHTGSDPAQVSANWVRAFADYTTASSALGGLTPREGGIPFFISATGASVFDSTAYGRGMLNVANASAARSYISAQESSVVLSNLSTVTRAANTVPYFNTDTSMATFNITAFGRGLVNAANAENARNFLGLANSAIITADPANRAHTLVYRDAAGNFDAGVITATLSGNATTASKLRAPVTINGVAFDGSQNIVLPGLDTSYAGVVARLHINGANMTGTDKTTQLALRNKSDTDWISLVTPDDSSLVFQFRGPEAANATLRVNSNVVFHAGNQYGLGATQTQARERLMVDRLAQNTTQTVLYNADKSRYFWLQDNGVSGIWDATTNTPLWRFSRLGQLDYGTVPVAQITGLANSATIPASASNMTNQIVVRSGTGDIAVQGVTAFGAVLGTDYIRVRASTGNAHLVFQRNDGAEVGLIWGIPSANSLNFRTAGGATGMSLAGQDLTVVGRVNAATLNSSGNVNSGNSVIAAGNVQAAGRVYCGDAFMSSNGNLTGGAFGSYGTLTNWVDSVYARKTDVMTDAQILAATSRGSAQAVGTYVFAIAASGSGDVGTVVAGTSLRSSSPINYHGTTLSGSYRCMGRFGAGASNQITLFQKVAD
Physico‐chemical
properties
protein length:685 AA
molecular weight: 71888,03650 Da
isoelectric point:8,80079
aromaticity:0,08759
hydropathy:-0,06920

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
XYS96762.1
1 685 aa
Domain Start End Length (AA) Confidence
N-terminal 1 313 313 0,6169
Central domain 314 512 200 0,1884
C-terminal 513 685 172 0,8372
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Pseudomonas phage vB_PaeM_ZGC [NCBI] · taxon 3436855
Uroviricota Caudoviricetes Vandenendeviridae Pakpunavirus Pseudomonas phage vB_PaeM_ZGC
Host
Pseudomonas aeruginosa [NCBI] · taxon 287
Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa

Coding sequence (CDS)

Genbank protein accession
XYS96762.1 [NCBI]
Genbank nucleotide accession
PV752213.1 [NCBI]
CDS location
range 475 -> 2532
strand +
CDS
ATGGCTGATTACAGTCAACTACCTATTGAAAATATTTGGTCCACAGGCGGGGATATGGTAGCCCCGACCCCTGCGCAGCAGCAAGGCGGATGGGGTATTCAGTCGGTTCCTCGCCAATGGTGGAACTGGAAGTGGAACCTTCACGATACTAACCTAGCGTATTTGCTACAGAAGGGCATCCCAGAGTGGACTAGTACACAAGAGTACATTGCTAACAAATCGTTCTGCACTAGAGGTGGATTTGTTTACAAGGCTGTTCGTACGCATACAGGAAGCGACCCTGCACAAGTTAGTGCCAACTGGGTTCGAGCTTTTGCAGATTACACCACAGCTAGTTCAGCACTAGGGGGCCTGACTCCAAGGGAAGGAGGTATTCCTTTCTTCATTAGCGCTACAGGAGCTAGCGTGTTTGACTCTACGGCCTATGGTCGCGGAATGTTGAATGTAGCTAATGCCTCCGCAGCTAGAAGCTACATTTCGGCTCAAGAAAGCTCTGTTGTACTGTCCAACCTGTCCACTGTGACTAGGGCTGCCAACACGGTTCCGTACTTCAACACGGATACCTCCATGGCTACCTTCAACATCACAGCGTTCGGAAGAGGACTTGTCAACGCGGCTAATGCTGAAAACGCAAGAAATTTCCTAGGACTAGCTAACTCTGCTATCATTACGGCAGACCCAGCTAACAGGGCACATACTCTGGTCTATAGAGACGCTGCTGGTAACTTCGACGCTGGTGTGATTACAGCCACTCTTTCTGGTAACGCGACTACAGCCAGCAAGCTCAGGGCTCCAGTTACGATTAACGGCGTAGCGTTCGACGGAAGCCAGAACATTGTTCTGCCGGGCCTAGATACAAGCTACGCCGGGGTTGTAGCGAGGCTCCATATTAATGGAGCTAACATGACCGGAACAGATAAGACTACCCAGTTGGCTCTTAGAAATAAATCTGATACAGATTGGATTAGCTTGGTGACTCCTGATGACAGCTCGTTGGTATTTCAATTTAGAGGGCCAGAAGCGGCTAACGCCACTCTGCGGGTTAACTCTAATGTTGTGTTCCACGCGGGAAACCAGTATGGACTAGGAGCTACTCAAACTCAAGCCAGAGAGCGGCTCATGGTTGACAGGCTGGCACAGAACACGACTCAGACTGTGCTGTACAACGCAGATAAGAGCAGGTACTTCTGGTTGCAAGATAACGGTGTTTCCGGTATCTGGGACGCAACGACTAACACCCCTCTATGGCGTTTTTCTAGACTAGGCCAGCTCGACTACGGAACAGTCCCTGTTGCACAAATTACAGGATTGGCCAACTCCGCGACAATTCCGGCATCCGCCTCCAATATGACTAATCAGATTGTTGTGAGGAGCGGAACAGGAGATATCGCAGTACAAGGCGTTACAGCGTTTGGCGCTGTTCTGGGAACAGACTATATTAGAGTAAGAGCCAGCACTGGTAACGCTCACCTAGTATTCCAGAGGAATGATGGAGCAGAGGTAGGGCTTATTTGGGGAATCCCGTCTGCCAACTCTCTGAACTTCAGGACCGCAGGCGGTGCGACAGGCATGTCTCTGGCTGGTCAGGACTTGACTGTAGTTGGCAGGGTGAATGCTGCGACACTCAATTCGTCTGGCAACGTCAACTCTGGCAACAGCGTGATTGCTGCCGGGAACGTGCAGGCTGCTGGCCGTGTGTACTGCGGCGATGCTTTTATGAGCAGCAACGGCAACCTTACTGGCGGAGCTTTCGGCTCTTATGGGACTCTTACCAACTGGGTAGATTCTGTATATGCAAGAAAGACGGACGTAATGACCGATGCCCAAATCTTGGCTGCCACTTCTAGAGGTAGTGCTCAGGCTGTGGGAACATATGTCTTTGCGATTGCAGCTAGCGGAAGTGGGGATGTTGGGACTGTAGTAGCTGGTACGTCTCTAAGGTCTTCGTCTCCCATCAACTACCACGGAACTACGCTATCCGGTAGCTACAGGTGCATGGGTAGGTTCGGAGCCGGAGCTTCTAACCAGATTACCTTGTTCCAGAAGGTTGCAGATTAA

Genome Context

Tertiary structure

XYS96762.1
ColabFold structure
Source ColabFold
pLDDT 75.5
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of a novel pseudomonas aeruginosa phage vB_PaeM_ZGC Zhang,L. 2024-11-16 — GenBank