Phage RBP Database

Genbank accession

CAO0867467.1 [GenBank]

Protein name

transglycosylase

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect

Probability 0,90

Seq2Symm

C1 confidence 1,000

C1	1,000
C2	0,004
C3	0,002

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MKVLRKGDRGDEVCQLQTLLNLCGYDVGKPDGIFGNNTFNQVVKFQKDNCLDSDGIVGKNTWAELFSKYSPPIPYKTIPMPTANKSRAAATPVMNAVENATGVRSQLLLTFASIESAFDYEIKAKTSSATGWFQFLTGTWKTMIENYGMKYGVITDPTGALRKDPRISALMGAELIKENMNILRPVLKREPTDTDLYLAHFFGPGAARRFLTTGQNELAATHFPKEAQANPSIFYNKDGSPKTIQEVYNLMDGKVAAHRK

Physico‐chemical properties

protein length:	260 AA
molecular weight:	28814,65140 Da
isoelectric point:	9,09657
aromaticity:	0,09615
hydropathy:	-0,37231

Domain architecture

CAO0867467.1

1 260 aa

ATT 1–78 · RBD 79–95 · STR 96–223 · RBD 224–260

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

G3DSA:1.10.101.10:FF:000016
Unmapped

G3DSA:1.10.101.10:FF:000016 G3DSA:1.10.530.10

IPR036366
ATT

IPR036366 G3DSA:1.10.530.10:FF:000045

IPR036365
RBD

IPR036365 IPR008258

IPR002477
CBM

IPR002477 IPR023346

CAO0867467.1

1260 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:1.10.101.10:FF:000016	Unmapped	-	1	70	FunFam	N-acetylmuramoyl-L-alanine amidase	-	-	-	-
IPR036366	ATT	IPR036366	1	78	Merged direct domain	PGBD superfamily	N-terminal	Low	Positional only	24 proteins / 24 hits
IPR036365	RBD	IPR036365	2	73	Merged direct domain	PGBD-like superfamily	C-terminal	Low	Positional only	2 proteins / 2 hits
IPR002477	CBM	DC_0556	9	65	InterPro cluster	Peptidoglycan binding-like	Central	High	Text match	24 proteins / 24 hits
G3DSA:1.10.530.10	RBD	G3DSA:1.10.530.10	79	260	Merged direct domain	G3DSA:1.10.530.10	C-terminal	Low	Positional only	95 proteins / 95 hits
G3DSA:1.10.530.10:FF:000045	Unmapped	-	79	260	FunFam	Peptidoglycan hydrolase gp181	-	-	-	-
IPR008258	ENZ	DC_0010	95	183	InterPro cluster	Transglycosylase SLT domain 1	C-terminal	High	Text match	100 proteins / 142 hits
IPR023346	STR	IPR023346	96	223	Merged direct domain	Lysozyme-like domain superfamily	Central	Low	Positional only	29 proteins / 29 hits

Proteins with similar domain architecture

Phage

Pseudomonas phage RLG_139 [NCBI] · taxon 3449669

Pseudomonas phage RLG_139

Host No host information

Genbank protein accession

CAO0867467.1 [NCBI]

Genbank nucleotide accession

OZ318777 [NCBI]

CDS location

range 150321 -> 151103
strand -

CDS

ATGAAAGTATTACGCAAAGGCGATAGGGGTGATGAGGTATGTCAACTCCAGACACTATTAAATCTATGTGGCTATGATGTTGGAAAGCCAGATGGTATTTTTGGAAATAATACCTTTAATCAGGTAGTTAAATTTCAAAAAGATAATTGTCTGGATAGTGATGGTATTGTAGGTAAGAATACTTGGGCTGAATTATTCAGTAAATATTCCCCACCTATTCCTTATAAAACTATCCCTATGCCAACTGCAAATAAATCACGTGCAGCTGCAACTCCAGTTATGAATGCAGTAGAAAATGCTACTGGTGTTCGTAGCCAGTTGCTATTAACATTTGCTTCTATTGAATCAGCATTCGATTACGAAATAAAAGCTAAGACTTCATCAGCTACTGGTTGGTTCCAATTCCTTACTGGAACATGGAAAACAATGATTGAAAACTATGGCATGAAGTATGGCGTAATTACTGATCCAACAGGTGCATTACGTAAAGATCCACGTATAAGTGCTTTAATGGGTGCCGAACTCATTAAAGAGAATATGAATATTCTTCGACCCGTCCTTAAACGTGAACCAACTGATACTGATCTTTATTTAGCTCACTTCTTTGGACCTGGTGCAGCGCGTCGTTTCTTGACCACTGGTCAGAATGAATTAGCTGCTACCCATTTCCCAAAAGAAGCTCAGGCAAACCCATCTATTTTTTATAATAAAGATGGGTCACCTAAAACCATTCAAGAAGTTTATAACCTAATGGATGGTAAAGTTGCAGCACATAGAAAATAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)