Genbank accession
AXG66769.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Seq2Symm
C7-C9 confidence 0,026
C7-C9 0,026
C1 0,005
C3 0,002
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MKSLKLMFCLLFVSCFSFGSTIVTSVGNSTFVSDSNGTTVYNKVGNQIYGSDGTSVNRYGNTTILNDGQGNSTIYNKVGNSTLGSDGTLIQNVGGSTFITDGNGKTTVCSHVGNSTFCN
Physico‐chemical
properties
protein length:119 AA
molecular weight: 12409,59690 Da
isoelectric point:7,64316
aromaticity:0,09244
hydropathy:-0,05882

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

AXG66769.1
1 119 aa
Domain Start End Length (AA) Confidence
N-terminal 1 86 86 0,2494
Central domain 87 108 23 0,8726
C-terminal 109 119 10 0,1418
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Dickeya phage vB_DsoM_JA29 [NCBI] · taxon 2283031

Coding sequence (CDS)

Genbank protein accession
AXG66769.1 [NCBI]
Genbank nucleotide accession
MH460461 [NCBI]
CDS location
range 27481 -> 27840
strand +
CDS
ATGAAATCTTTAAAACTTATGTTCTGCCTTTTGTTTGTTTCCTGTTTCAGCTTCGGAAGCACTATCGTAACTTCTGTCGGAAACAGTACATTTGTTTCGGATAGTAACGGAACAACGGTATACAACAAGGTGGGAAATCAGATTTACGGAAGCGATGGAACATCTGTAAATAGGTATGGTAACACCACTATTCTGAATGACGGGCAAGGCAATTCCACCATCTATAATAAAGTTGGTAACAGCACGTTAGGCAGCGACGGCACGCTGATTCAGAATGTAGGCGGCAGCACTTTTATTACTGACGGCAACGGTAAAACAACTGTTTGCTCTCATGTAGGAAACTCAACCTTCTGCAATTAG

Genome Context

Tertiary structure

AXG66769.1
ESMFold structure
Source ESMFold
pLDDT 75.4
Oligomeric state monomer

Literature

Title Authors Date PMID Source
Jumbo Bacteriophages Are Represented Within an Increasing Diversity of Environmental Viruses Infecting the Emerging Phytopathogen, Dickeya solani Day,A.W., Ahn,J. and Salmond,G.P.C. 2018 30258425 GenBank