Protein

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Genbank accession
YP_009286512.1 [GenBank]
Protein name
fibritin neck whisker
RBP type
TF
Evidence RBPdetect2
Probability 0,77
Seq2Symm
C3 confidence 0,994
C3 0,994
C1 0,153
C2 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MELKPLPFVNGLPEEGQQRINWIKNGEELTGASTKFGTDGELNRGPNQVQANVVVLDENVRKIGTASTEMSAQIKTINSILEVSGNTEALSQIGKNTTDIGLLKQSVTTIQDGVLELDTRTTFIEEDIGVFNSSLDSVHRPIRDDLYWIKKEIGQYPGQDINGQAVTGNEATGMKRRIIDNSSAINNNTTRLSKLEKSFSDSDVGSLTAEVNSLRAEIGPKPTGAIDPVYTRLTRMNGSIGGLATNMEDVMDSIGFNTGITSIITLVNKNTADIVGVNGKLSNPTTGVIPRLDIVEAKIGDSASPSSINGRIKLNTDSINSLNLIVGADTSSGLRGQVAWINQTVGIVPSGSSPAPTSVIYRVDHLETQQDSINGSIQNLQIEIGNNTEGGLKGQVIRLNTIINGTSSGGTVEQKGLLPTVKEHEVSINKLNLDIQTLVPEAPMDGKAYVRRDGAWVDITTLTP
Physico‐chemical
properties
protein length:464 AA
molecular weight: 49596,04610 Da
isoelectric point:4,91131
aromaticity:0,03233
hydropathy:-0,29138

Taxonomy

Phage
Salmonella phage vB_SnwM_CGG4-1 [NCBI] · taxon 1815631
Uroviricota Caudoviricetes Pantevenvirales Straboviridae Gelderlandvirus Gelderlandvirus cgg41
Host
Salmonella enterica subsp. enterica serovar Newport [NCBI] · taxon 108619
Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Salmonella Salmonella enterica

Coding sequence (CDS)

Genbank protein accession
YP_009286512.1 [NCBI]
Genbank nucleotide accession
NC_031065 [NCBI]
CDS location
range 78157 -> 79551
strand +
CDS
ATGGAATTAAAGCCATTACCGTTTGTTAATGGCCTTCCAGAAGAAGGCCAACAGCGTATAAATTGGATTAAAAATGGGGAGGAACTAACTGGTGCCAGCACAAAATTTGGTACTGATGGTGAACTGAACCGTGGACCCAACCAAGTACAGGCTAACGTGGTTGTTTTGGATGAAAACGTTAGAAAAATTGGAACGGCTTCTACCGAGATGTCGGCTCAAATAAAAACGATTAATAGCATTTTAGAAGTTTCTGGTAATACGGAAGCTTTATCACAAATTGGTAAAAACACGACAGATATTGGTTTATTAAAACAGTCTGTTACTACTATTCAAGACGGCGTTCTTGAACTTGACACCAGAACGACTTTCATTGAAGAAGATATTGGAGTTTTTAATTCTTCTTTGGATAGCGTTCATCGTCCTATTCGTGATGATTTATACTGGATTAAAAAAGAAATTGGCCAATATCCAGGTCAAGACATAAATGGACAGGCTGTTACCGGAAATGAAGCCACGGGCATGAAACGCCGAATTATTGATAACTCTTCTGCTATCAATAATAACACAACCCGTCTTTCTAAACTTGAAAAATCTTTTTCAGATTCTGATGTTGGTTCTTTGACAGCTGAAGTGAATAGCTTGCGCGCTGAAATAGGTCCAAAACCGACTGGAGCTATAGACCCGGTTTATACTCGTTTAACCAGAATGAATGGCAGTATTGGTGGTCTTGCTACCAATATGGAAGACGTCATGGATTCAATAGGATTTAATACTGGTATTACTAGCATTATTACCTTGGTTAATAAAAATACCGCTGATATTGTTGGAGTAAATGGAAAACTTTCTAATCCTACTACCGGTGTTATTCCAAGATTAGACATTGTTGAAGCAAAAATTGGAGATTCTGCTTCTCCTAGTTCTATAAATGGAAGAATAAAATTAAACACCGATTCAATAAATAGTTTGAATTTAATTGTGGGTGCGGATACTTCATCTGGGCTTAGAGGACAAGTTGCTTGGATAAATCAGACTGTCGGTATTGTTCCGAGCGGCTCTTCTCCTGCGCCGACTTCCGTAATTTATAGAGTGGACCATTTAGAAACTCAACAAGATTCTATTAATGGCTCTATTCAAAACCTGCAGATAGAAATCGGTAACAATACGGAAGGAGGACTTAAAGGTCAAGTAATTCGTTTAAATACTATTATCAACGGCACATCTTCCGGCGGTACAGTTGAACAAAAAGGATTGCTTCCTACCGTAAAAGAACATGAAGTAAGCATTAATAAATTAAACCTAGATATACAAACTCTTGTTCCAGAGGCCCCAATGGATGGAAAGGCTTATGTACGTCGAGATGGTGCCTGGGTTGATATTACAACTTTAACTCCATAA

Genome Context

Tertiary structure

YP_009286512.1
ESMFold2 structure
Source ESMFold2
pLDDT 63.0
Oligomeric state monomer
Download structure