Protein

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Genbank accession
AOO05896.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TSP
Evidence RBPdetect2
Probability 0,79
Protein sequence
MSLTRLKNIITSRTGRIIYVNPDDFDASDAIDNRGNSALRPFKSIQRAFLEVARFSYRVGLSNDEFDAFSIMLYPAEYVIDNRPGKVLYTDVPPIDSNSNLDLTSPNNVLYYYNSVEGGVIVPRGCSLVGTDLRRTKIIPKYVPYPTTYTAKGINTEDDVPPRTAIFKVTGGTYFWQFSFFDGAEEGVYFKPDSTETLSPKFSHHRLTCFEFADGLNPLSKLISDGTVPNTDYSAVPNILERTDLDIYYQKVSKAFATIPDTSGDPTTDQIQARVEENRIVGPISDEYRVLQITRNGQTATAVTVDEFDNPRDHGFSVGVNINVSGVTGSTGPQSEVDATVFNGSFTVTSTPTGSTFTYQLASVPSGNAVGSNVTVKTEIDTVDSASPYAFNLSLRSVWGMNGMHANGAKATGFKSMVVAQFTGLSLQKDDRAFVRYNASTGNYDVATAGDGAHLDGFAEYRKGWGHEHIKCSNDSFIQAVSVFAVGYFGHFTAESGADMSITNSNSNFGNTALRSAGFKAKAFSKDKAAEITHIIPPKALNVISTTATGSSGSPNITLANDGSINGVIEGMTVSGTNLAAGATVVSFNTNTRVITLSGNNTAAVDTNIIFGEETSVNWVNVDIQRTKVINSALSGQGGIAGSRLYLYGYVTEASPPTTKVQGFAIGSRQDGTGVDAIPDKLNVLLVANGASSATVQTAKISPYGPDVSNKAAGDTGSPLQYDSATYTINGQAGSVGGWYLSVDPNDNQIYTTLSTNSQYNNVNFTPTTFIKRIPDPRDLQDRTYRVRMVIDKDKTNPLPRDPLSGYVVQPLNSDTTSYNLNRTFYIYDIEVVQKFERGVKDGIYYITLLCASIAPSTSNFNDRKFSQNVNEVYPTFDRDNPVADPVAAISVADNETIGLVNATDGANPTPNKDPKLSITKEAIKFLLTDTGWTQPGTTPNYDSVNGRLSNVELTARAGNEETRKINIRENNDGTVAPINVEFRRHSILRSGNHTFEYLGFGPGNYSTAFPQTQVETLSADQVKFSQSIKEEAGVAFYSGLNSNGDLFIGNQIINPVTGQITNEDIAQLNVVGEENTTIQTFSELVLTDKLTVIGGASNQLESIFAGPVTFQAQTSFTNNLTAKKITYNNQDGTVIKQTLLAPADANGQPSFAAITGYDTPGNGDLVYNINWTPGQSLGWIYYNGTWHEFGLTDTGDINIDTFNNEQHIGIGTAAVSSFRVGILGSAKVDGDLVVTGRGGVGADKYVTKTYTGDGTTLTFAVTTYGGGIQHSDDSLLVFLNGVAQIAGTNYTVDANGANVVFSSGDAPQSTDTVHILELPI
Physico‐chemical
properties
protein length:1321 AA
molecular weight: 142043,38660 Da
isoelectric point:4,85583
aromaticity:0,09387
hydropathy:-0,26851

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AOO05896.1
1 1321
Domain Start End Length (AA) Confidence
N-terminal 1 91 91 0,9062
Central domain 92 310 220 0,9553
C-terminal 311 1321 1010 0,0961
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-91
Central
92-310
C-terminal
311-1321

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-RIM2
[NCBI] 		687800 Uroviricota > Caudoviricetes > Pantevenvirales > Nerrivikvirus > Nerrivikvirus srim2
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOO05896.1 [NCBI]
Genbank nucleotide accession
KX349265.1 [NCBI]
CDS location
range 22584 -> 26549
strand +
CDS
ATGTCTCTAACTAGACTTAAGAATATTATTACGTCCCGCACGGGACGTATTATTTACGTTAACCCTGACGACTTTGATGCTTCTGATGCTATTGACAACAGAGGCAACTCAGCATTGCGTCCGTTTAAGTCTATTCAAAGAGCATTTCTTGAAGTTGCTAGATTTTCGTATCGTGTTGGTCTGAGTAATGACGAATTCGATGCGTTCAGTATCATGCTCTACCCTGCAGAGTATGTGATCGATAACCGTCCTGGTAAAGTTCTTTATACTGATGTCCCTCCTATTGATTCTAACTCTAATCTGGACCTGACTTCACCTAATAATGTTTTGTATTATTACAACTCAGTAGAAGGAGGAGTCATTGTTCCCAGAGGTTGTTCGCTGGTTGGCACCGACTTACGTCGTACCAAGATTATTCCTAAGTACGTTCCTTATCCTACGACATATACTGCGAAGGGAATCAACACAGAGGATGATGTTCCTCCCCGCACCGCAATCTTCAAGGTCACAGGTGGTACATACTTCTGGCAGTTCTCCTTCTTCGATGGTGCTGAGGAAGGTGTATACTTCAAACCCGATAGCACTGAAACTCTTTCCCCCAAGTTCTCACACCATAGACTAACTTGCTTTGAGTTTGCTGATGGTCTCAATCCTCTTTCCAAGTTAATCTCTGACGGCACTGTTCCTAACACAGATTATTCTGCTGTGCCTAACATTCTAGAGAGAACTGACCTAGACATTTACTACCAGAAAGTATCGAAGGCATTCGCAACTATTCCTGATACATCTGGTGATCCTACTACTGACCAGATTCAGGCAAGGGTCGAAGAAAACAGAATCGTTGGTCCTATTTCCGATGAATACAGAGTCCTTCAGATCACAAGAAATGGTCAGACAGCAACGGCAGTTACTGTTGATGAGTTTGATAACCCCAGAGACCATGGATTTAGTGTTGGCGTCAACATTAACGTTTCAGGTGTTACTGGATCAACTGGACCGCAATCCGAAGTTGATGCAACAGTTTTTAACGGATCTTTCACCGTCACTTCGACGCCAACTGGTAGCACATTTACTTACCAGTTAGCATCTGTACCATCAGGTAATGCTGTTGGTTCTAATGTTACTGTTAAGACTGAAATTGATACTGTTGACTCTGCATCTCCATATGCATTCAACCTGTCACTGAGAAGTGTTTGGGGTATGAATGGTATGCACGCGAACGGTGCTAAGGCAACTGGTTTCAAATCGATGGTTGTTGCACAGTTCACGGGTCTATCTCTACAGAAAGATGATAGAGCGTTTGTAAGATATAATGCTTCTACTGGTAACTATGATGTAGCAACTGCTGGTGATGGTGCTCACCTGGATGGTTTTGCTGAGTATCGTAAAGGATGGGGACATGAGCACATTAAGTGTTCTAATGACTCCTTCATTCAGGCGGTTTCGGTGTTCGCTGTTGGATACTTCGGTCACTTCACTGCTGAAAGTGGTGCTGACATGTCAATCACCAACTCCAACAGTAACTTTGGAAACACTGCGTTAAGATCTGCTGGATTTAAGGCAAAAGCATTCTCCAAGGATAAAGCAGCAGAGATTACTCATATCATTCCACCTAAGGCACTGAACGTTATTTCGACAACTGCAACAGGTTCTTCAGGTTCGCCAAATATCACACTTGCTAATGATGGTAGCATCAACGGTGTTATCGAAGGTATGACAGTTTCTGGAACTAATCTTGCTGCTGGTGCTACTGTTGTTTCCTTCAACACTAACACTAGAGTTATCACACTGTCTGGAAATAATACAGCAGCAGTTGACACTAACATCATCTTTGGTGAAGAAACATCTGTCAACTGGGTTAACGTTGATATTCAACGTACTAAGGTAATCAACTCTGCACTTTCTGGTCAGGGTGGTATTGCTGGTTCTAGACTTTATCTCTATGGATATGTCACGGAAGCATCTCCTCCAACAACAAAGGTTCAAGGTTTTGCTATTGGATCACGTCAAGATGGCACAGGTGTTGATGCTATACCAGACAAACTGAATGTACTTTTGGTTGCTAATGGTGCATCTTCTGCAACAGTTCAGACTGCTAAGATTTCACCTTATGGTCCTGATGTTTCCAACAAAGCAGCAGGTGATACTGGTTCACCTCTGCAATATGATAGTGCAACATACACTATCAATGGTCAAGCAGGTTCCGTTGGTGGTTGGTATCTGAGTGTAGATCCTAACGATAATCAAATCTACACAACTCTTTCTACCAACTCACAGTACAACAACGTAAACTTCACCCCTACAACTTTCATTAAGAGGATTCCTGACCCTCGTGACCTGCAGGATAGAACATATCGTGTCCGTATGGTTATCGATAAGGATAAGACTAATCCTCTGCCTCGTGATCCTCTCAGCGGTTATGTTGTACAACCTCTGAATAGTGACACTACAAGTTACAATCTGAACAGAACATTCTATATCTACGATATCGAAGTTGTTCAGAAATTCGAGAGAGGCGTTAAAGATGGCATCTACTACATTACCTTGCTTTGTGCATCTATTGCACCTAGCACTTCTAACTTCAACGACAGGAAGTTCTCTCAAAACGTCAACGAAGTCTATCCTACGTTTGACAGAGACAACCCTGTTGCTGACCCTGTTGCTGCGATTTCCGTCGCTGACAACGAAACTATCGGTCTTGTAAATGCAACTGATGGTGCTAACCCTACACCCAACAAAGATCCCAAACTGTCTATTACTAAAGAAGCGATTAAGTTCCTTCTGACTGATACTGGTTGGACACAACCAGGTACAACACCCAACTATGACTCTGTTAATGGAAGACTATCTAATGTCGAACTAACTGCACGTGCTGGAAATGAAGAAACTAGGAAGATCAACATCCGCGAAAACAATGATGGGACTGTCGCACCTATCAATGTTGAGTTCAGGAGGCACTCGATCCTTAGATCTGGTAACCATACGTTTGAGTATCTTGGTTTCGGTCCTGGTAACTATTCAACTGCATTCCCTCAAACTCAGGTAGAAACTCTGAGTGCAGATCAGGTTAAGTTCTCTCAGTCGATTAAAGAAGAAGCAGGTGTTGCATTCTACTCTGGTCTGAACTCTAACGGTGACCTGTTTATTGGTAACCAGATTATCAACCCTGTTACAGGTCAGATTACTAATGAAGATATTGCACAGTTGAATGTTGTTGGTGAAGAAAACACTACGATTCAGACATTCTCTGAGTTGGTTCTTACCGACAAACTGACCGTTATTGGTGGTGCATCTAACCAGTTAGAATCTATCTTTGCTGGTCCTGTTACATTCCAAGCACAAACATCCTTTACTAATAATCTTACTGCCAAAAAGATTACTTATAACAACCAGGATGGTACGGTAATCAAGCAAACGTTACTCGCTCCCGCCGATGCAAATGGACAACCAAGTTTTGCTGCTATCACAGGATACGATACACCTGGTAATGGTGATCTTGTTTACAATATCAATTGGACACCTGGGCAGTCGCTTGGTTGGATTTATTACAATGGAACGTGGCACGAGTTTGGTCTCACGGATACTGGTGACATTAATATCGATACTTTCAATAATGAGCAACATATCGGTATTGGTACTGCTGCTGTATCTAGTTTCCGTGTTGGCATCCTCGGAAGCGCCAAAGTAGATGGTGACCTTGTTGTTACTGGACGAGGTGGTGTTGGTGCTGATAAGTATGTCACTAAGACATATACTGGTGACGGCACAACTCTGACATTTGCAGTTACTACCTATGGTGGTGGTATTCAGCATTCTGATGATTCACTGCTGGTATTCCTGAACGGTGTTGCACAGATTGCAGGTACAAACTACACAGTTGACGCTAACGGTGCAAACGTTGTATTCAGTTCTGGTGATGCACCACAATCTACAGATACAGTCCACATTTTAGAACTGCCTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6145b3289ec17e89b140cec89037379009a72f2d35afa86b08d818c7fa2b73bb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3655
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50