Protein

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Genbank accession
XHH73736.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MILENACEFKEYLPGVFDELGFNGSFEVIDNAIHLNLIPIDNQETPTKEQILEKIKETMIKRKKQELEKEINTICKEKIINGFKSEVLGSLHAYDLTLEDQANLQALVIASIDSIFRCAEVINGVAGFKTYKKHTKAQLLKLSQEALKFKSDLILFYGREKERLNAINSLEALEKFSIKEYLTYEEV
Physico‐chemical
properties
protein length:187 AA
molecular weight: 21464,52690 Da
isoelectric point:5,27769
aromaticity:0,08556
hydropathy:-0,24813

Domains

Domains [InterPro]
DC_0271
STR
1–186
DC_0271
Coil
Unmapped
48–68
Coil
XHH73736.1
1 187
Architecture
STR
STR 1-186 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Helicobacter phage Pt11468_1
[NCBI] 		3331676 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHH73736.1 [NCBI]
Genbank nucleotide accession
PQ159901.1 [NCBI]
CDS location
range 22387 -> 22950
strand -
CDS
ATGATTTTAGAAAACGCATGCGAGTTTAAAGAATACCTACCGGGTGTTTTTGATGAGTTAGGTTTTAATGGGAGTTTTGAAGTGATTGATAACGCTATACACCTTAACCTTATTCCAATAGATAACCAAGAAACGCCGACTAAAGAGCAGATTTTAGAAAAAATCAAAGAAACCATGATTAAAAGAAAAAAGCAAGAACTAGAAAAAGAAATTAATACTATCTGTAAAGAAAAAATCATTAACGGGTTTAAAAGCGAGGTTTTAGGTAGCTTGCATGCGTATGATTTGACTTTAGAAGATCAAGCGAACTTGCAGGCTTTAGTGATAGCCTCCATTGATTCGATTTTTAGGTGCGCTGAAGTGATTAACGGCGTTGCAGGTTTCAAAACCTACAAAAAACACACGAAAGCGCAATTATTGAAATTATCTCAAGAAGCTCTAAAATTCAAAAGCGATTTGATTTTGTTTTATGGCAGAGAAAAAGAACGCCTGAACGCTATCAATAGTTTAGAAGCGTTAGAAAAATTTTCAATTAAAGAATACTTGACATATGAGGAAGTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
fb01b10f2fb3143fed7b988609a5f844d5e5b2d9eb68a9533c0bdba96e67993f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8843
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Screening and in silico characterization of prophages in Helicobacter pylori clinical strains Ferreira,R., Pinto,G., Presa,E., Oleastro,M., Silva,C., Vieira,L., Sousa,C., Pires,D.P., Figueiredo,C. and Melo,L.D.R. — — GenBank