Protein

View in Explore
Genbank accession
AOQ29525.1 [GenBank]
Protein name
recepter binding protein
RBP type
TF
Evidence RBPdetect
Probability 0,70
Protein sequence
MTIKKFTFFSPNGTEFPVSANADAKLYMLLSEKDYSQFLIRHWETPINTALNRIYTSTSLLVGGRYFELYNEAVALNSNATNFVHANIDISNVTNPVTISVETSNNSNQVDINTGVGVLKKCIEVVETNAIGVSAVTKPSGSSIIEKIYPVGAYYFSSQPTEPATLFGFGTWSRVKGRGLVGVDESDSALSSGGKQGGSTNPLSQHTITPSSGQFVVARGAGKWHWSSGGAPSNSYAMDTENGGITVGDNTNHNNWQPFEAAYIWKRIN
Physico‐chemical
properties
protein length:269 AA
molecular weight: 29050,92550 Da
isoelectric point:6,20656
aromaticity:0,10409
hydropathy:-0,26059

Domains

Domains [InterPro]
G3DSA:2.60.520.10
STR
1–139
G3DSA:2.60.520.10 IPR053827
SSF141658
STR
2–139
SSF141658 IPR053827
IPR048780
RBD
2–135
IPR048780
SSF141658
STR
2–150
SSF141658
AOQ29525.1
1 269
Architecture
STR
ATT
STR 1-143 | ATT 144-268 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage 2R14S
[NCBI] 		1874576 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis subsp. lactis bv. diacetylactis
[NCBI] 		44688 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Lactococcus > Lactococcus lactis

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOQ29525.1 [NCBI]
Genbank nucleotide accession
KX346236 [NCBI]
CDS location
range 14441 -> 15250
strand +
CDS
ATGACAATTAAAAAATTCACGTTTTTCAGTCCAAACGGTACAGAATTTCCAGTTTCCGCAAATGCTGACGCAAAACTGTACATGTTACTTTCTGAAAAAGACTATTCGCAATTCTTAATAAGGCATTGGGAAACGCCTATAAATACAGCTCTCAATAGAATTTATACAAGCACAAGTTTATTAGTAGGTGGAAGATATTTTGAGCTTTACAATGAAGCAGTAGCCTTAAATTCAAATGCTACGAACTTTGTCCATGCAAATATAGACATTTCTAATGTTACAAACCCAGTGACGATAAGCGTAGAAACTTCTAATAACTCAAATCAAGTTGACATCAATACAGGTGTCGGAGTTCTTAAAAAGTGTATTGAAGTTGTTGAAACAAACGCAATAGGAGTAAGTGCAGTTACAAAACCGTCAGGAAGTAGTATTATAGAAAAAATTTATCCAGTTGGAGCATATTACTTTAGTTCGCAACCAACTGAACCAGCTACATTGTTTGGATTTGGGACTTGGTCAAGAGTTAAAGGTCGTGGGTTAGTTGGGGTTGATGAATCTGATTCAGCTTTATCTAGCGGCGGCAAACAAGGTGGTTCAACAAATCCGTTGTCACAACACACAATAACTCCTTCAAGTGGACAGTTTGTTGTCGCTCGTGGGGCAGGAAAGTGGCACTGGTCTTCTGGTGGAGCTCCAAGTAATTCTTATGCTATGGATACAGAAAACGGCGGAATCACAGTTGGAGATAACACTAATCATAATAACTGGCAACCATTCGAGGCAGCTTATATTTGGAAACGTATAAATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
a9a68ca10188da010648457231d1ae5845597b9d059e21aff28ad4bfe3746130
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7699
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages play LEGO with their Carbohydrate Binding Modules Hayes,S. 2019-07-02 — GenBank