Protein

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Genbank accession
YP_009195788.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTFKELVNKVRNLVLEAKNVTIEDTENNFTSDNVEGALKEVFQNGVNAKNNVVTALNSKGAEVTTSDTWEEIKNKIDIKEGRLDLRETILANSYSSYLVTNGAIKYIEKYSGSLKALEYEEPYFYAIKGTHLIKINAIDESVIFDITLANANFSCICVTQEYLFISDNTKLYKINKLTGNEAQSIEGSYYKLCTYGEFIYGIYGDETSSILHKIRISDMYIMLTKDMSSDRIYDFERGKFVCNNNGIYATTEHSNSSGLTECYLTKINFDFSVAKSFRIGGYLYEKNIKFLNDFVFVSDSSRSIEVESGKKSGLAKYDANLNLITYGGSDRYENFEIYNGYIYTFNSLSSSPFIKINLNTLKEVNSYRTLINTNPQKGMFIINNIIFFIGGGIHRNILSKKVYSDEKGEEL
Physico‐chemical
properties
protein length:411 AA
molecular weight: 46679,09720 Da
isoelectric point:5,42928
aromaticity:0,12409
hydropathy:-0,30049

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009195788.1
1 411
Domain Start End Length (AA) Confidence
N-terminal 1 100 100 0,9861
Central domain 101 395 296 0,6736
C-terminal 396 411 15 0,8043
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-100
Central
101-395
C-terminal
396-411

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiCD505
[NCBI] 		1582154 Uroviricota > Caudoviricetes > Colneyvirus >
Host Clostridioides difficile
[NCBI] 		1496 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Peptostreptococcales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009195788.1 [NCBI]
Genbank nucleotide accession
NC_028764 [NCBI]
CDS location
range 23937 -> 25172
strand +
CDS
ATGACTTTTAAAGAGTTAGTTAATAAAGTTAGAAATCTTGTATTAGAAGCAAAGAATGTAACTATAGAAGATACAGAGAATAACTTTACAAGTGATAATGTAGAAGGAGCATTAAAAGAGGTTTTTCAAAATGGAGTTAATGCTAAAAATAATGTAGTAACAGCATTAAACTCCAAGGGAGCAGAGGTTACTACAAGCGATACATGGGAAGAAATAAAGAATAAAATTGATATAAAAGAGGGGAGATTAGATTTAAGAGAAACAATACTTGCAAATAGTTATTCTTCATATTTGGTTACAAATGGTGCTATAAAATATATTGAAAAATATAGTGGGAGTTTAAAAGCATTAGAATATGAAGAACCCTATTTTTATGCAATTAAAGGTACACATTTAATTAAAATTAATGCAATTGATGAATCTGTAATTTTTGATATTACTTTAGCCAATGCTAACTTCTCATGTATCTGTGTTACTCAAGAGTATTTATTTATATCTGACAATACTAAATTATATAAAATAAATAAGTTAACAGGAAATGAAGCACAGTCAATAGAAGGTTCTTATTATAAGCTATGTACTTATGGGGAATTTATTTATGGAATATATGGAGATGAGACTTCTTCAATACTTCACAAAATAAGAATATCGGATATGTATATAATGCTAACTAAAGATATGTCCTCTGATAGAATTTATGACTTTGAAAGAGGCAAATTTGTATGTAATAATAATGGTATTTATGCTACAACAGAACACTCAAATTCAAGTGGTCTTACAGAATGTTACCTAACTAAAATAAATTTTGATTTTAGTGTTGCGAAAAGTTTTAGAATTGGAGGATATTTATATGAAAAAAACATTAAGTTTTTAAATGATTTTGTTTTTGTATCTGATAGTAGCAGAAGCATAGAAGTTGAGAGTGGTAAAAAAAGTGGATTAGCAAAATATGATGCAAATCTAAATTTGATTACTTATGGTGGGTCAGATAGATATGAAAATTTTGAAATATATAATGGATATATATATACATTTAATTCACTTTCTAGTAGCCCATTTATAAAAATAAATTTAAATACTCTTAAAGAAGTTAATAGCTACCGAACGCTCATTAACACAAATCCTCAAAAAGGTATGTTTATAATAAACAATATAATTTTTTTTATTGGTGGTGGCATTCACAGAAATATATTATCAAAAAAGGTTTATTCAGATGAAAAAGGAGAGGAATTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
db2987820c3f12e8fef8373256074487fc3b3580907804044e0dcdb9fb33e00e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7864
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole Genome Sequence and Molecular Characterization of Siphoviridae / Myoviridae Phage Infecting Clostridium difficile Monot,M. 2011-08-01 — GenBank