Protein

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Genbank accession

YP_009195788.1 [GenBank]

Protein name

hypothetical protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect2

Probability 0,47

Seq2Symm

C1 confidence 1,000

C1	1,000
C3	0,002
C7-C9	0,000

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MTFKELVNKVRNLVLEAKNVTIEDTENNFTSDNVEGALKEVFQNGVNAKNNVVTALNSKGAEVTTSDTWEEIKNKIDIKEGRLDLRETILANSYSSYLVTNGAIKYIEKYSGSLKALEYEEPYFYAIKGTHLIKINAIDESVIFDITLANANFSCICVTQEYLFISDNTKLYKINKLTGNEAQSIEGSYYKLCTYGEFIYGIYGDETSSILHKIRISDMYIMLTKDMSSDRIYDFERGKFVCNNNGIYATTEHSNSSGLTECYLTKINFDFSVAKSFRIGGYLYEKNIKFLNDFVFVSDSSRSIEVESGKKSGLAKYDANLNLITYGGSDRYENFEIYNGYIYTFNSLSSSPFIKINLNTLKEVNSYRTLINTNPQKGMFIINNIIFFIGGGIHRNILSKKVYSDEKGEEL

Physico‐chemical properties

protein length:	411 AA
molecular weight:	46679,09720 Da
isoelectric point:	5,42928
aromaticity:	0,12409
hydropathy:	-0,30049

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

YP_009195788.1

1 411 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	100	100	0,9861
Central domain	101	395	296	0,6736
C-terminal	396	411	15	0,8043

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage

Clostridium phage phiCD505 [NCBI] · taxon 1582154

Uroviricota Caudoviricetes Colneyvirus Colneyvirus CD505

Host

Clostridioides difficile [NCBI] · taxon 1496

Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Clostridioides Clostridioides difficile

Coding sequence (CDS)

Genbank protein accession

YP_009195788.1 [NCBI]

Genbank nucleotide accession

NC_028764 [NCBI]

CDS location

range 23937 -> 25172
strand +

CDS

ATGACTTTTAAAGAGTTAGTTAATAAAGTTAGAAATCTTGTATTAGAAGCAAAGAATGTAACTATAGAAGATACAGAGAATAACTTTACAAGTGATAATGTAGAAGGAGCATTAAAAGAGGTTTTTCAAAATGGAGTTAATGCTAAAAATAATGTAGTAACAGCATTAAACTCCAAGGGAGCAGAGGTTACTACAAGCGATACATGGGAAGAAATAAAGAATAAAATTGATATAAAAGAGGGGAGATTAGATTTAAGAGAAACAATACTTGCAAATAGTTATTCTTCATATTTGGTTACAAATGGTGCTATAAAATATATTGAAAAATATAGTGGGAGTTTAAAAGCATTAGAATATGAAGAACCCTATTTTTATGCAATTAAAGGTACACATTTAATTAAAATTAATGCAATTGATGAATCTGTAATTTTTGATATTACTTTAGCCAATGCTAACTTCTCATGTATCTGTGTTACTCAAGAGTATTTATTTATATCTGACAATACTAAATTATATAAAATAAATAAGTTAACAGGAAATGAAGCACAGTCAATAGAAGGTTCTTATTATAAGCTATGTACTTATGGGGAATTTATTTATGGAATATATGGAGATGAGACTTCTTCAATACTTCACAAAATAAGAATATCGGATATGTATATAATGCTAACTAAAGATATGTCCTCTGATAGAATTTATGACTTTGAAAGAGGCAAATTTGTATGTAATAATAATGGTATTTATGCTACAACAGAACACTCAAATTCAAGTGGTCTTACAGAATGTTACCTAACTAAAATAAATTTTGATTTTAGTGTTGCGAAAAGTTTTAGAATTGGAGGATATTTATATGAAAAAAACATTAAGTTTTTAAATGATTTTGTTTTTGTATCTGATAGTAGCAGAAGCATAGAAGTTGAGAGTGGTAAAAAAAGTGGATTAGCAAAATATGATGCAAATCTAAATTTGATTACTTATGGTGGGTCAGATAGATATGAAAATTTTGAAATATATAATGGATATATATATACATTTAATTCACTTTCTAGTAGCCCATTTATAAAAATAAATTTAAATACTCTTAAAGAAGTTAATAGCTACCGAACGCTCATTAACACAAATCCTCAAAAAGGTATGTTTATAATAAACAATATAATTTTTTTTATTGGTGGTGGCATTCACAGAAATATATTATCAAAAAAGGTTTATTCAGATGAAAAAGGAGAGGAATTATGA

Genome Context

Tertiary structure

YP_009195788.1

ESMFold structure

Source ESMFold

pLDDT 78.6

Oligomeric state monomer

Download structure

Literature

Title	Authors	Date	PMID	Source
Whole Genome Sequence and Molecular Characterization of Siphoviridae / Myoviridae Phage Infecting Clostridium difficile	Monot,M.	2011-08-01	—	GenBank