Protein

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Genbank accession
WVX90423.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Seq2Symm
C2 confidence 0,976
C2 0,976
C1 0,179
C3 0,000
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MNPTYLKQIMQLAWQFFKQTGLKFSECLKKAWANYKLKKRMQQGIVRFYFQKVDGTIREAWGTLKADLMPETKGSERKENPTTQVYFDTEVNEFRCFKKFNLIY
Physico‐chemical
properties
protein length:104 AA
molecular weight: 12537,48510 Da
isoelectric point:9,69677
aromaticity:0,16346
hydropathy:-0,66154

Domains

View on InterPro
Domain architecture
WVX90423.1
1 104 aa
STR 35–103 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Riemerella phage vB_RanS_GDF21 [NCBI] · taxon 3113642
Uroviricota Caudoviricetes Riemerella phage vB_RanS_GDF21
Host
Riemerella anatipestifer [NCBI] · taxon 34085
Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Riemerella Riemerella anatipestifer

Coding sequence (CDS)

Genbank protein accession
WVX90423.1 [NCBI]
Genbank nucleotide accession
PP067981.1 [NCBI]
CDS location
range 710 -> 1024
strand +
CDS
ATGAACCCAACATATTTAAAACAAATAATGCAATTAGCGTGGCAGTTTTTCAAACAAACAGGTTTAAAATTTAGCGAATGCCTAAAAAAAGCGTGGGCAAATTACAAACTAAAAAAGAGAATGCAACAGGGTATTGTTCGTTTCTACTTTCAAAAGGTAGACGGTACTATCAGAGAAGCGTGGGGTACTTTGAAAGCCGATTTAATGCCTGAAACCAAAGGTTCAGAACGAAAAGAAAACCCAACCACACAAGTCTATTTTGATACAGAGGTCAATGAGTTTAGGTGTTTTAAAAAGTTTAATTTAATATATTGA

Genome Context

Tertiary structure

WVX90423.1
ESMFold structure
Source ESMFold
pLDDT 85.9
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Characterization and genome analysis of phage vB_RanS_GDF21 against Riemerella anatipestifer Liu,C., Zhao,Y., Cao,S., Zhu,X. and Li,Y. 2012-06-15 — GenBank