Protein

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Genbank accession
YP_005098229.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MDYDTSGFPLGSKDPRVLYKNAKNFDYAMNDRESVSWVDRFGVSRKTWFGVEQQVNDYLASQGFEPGVLEYVDGSPLTVDRPTQLIQRGDNIYSVKRPASFPVNLTGNWATDQNLLVAQVDRTLQDTLATSAGAGMIGYRERTVADRLNDTANVKDYGAIADGAYHPLSERFATLAEAQAVYPHATALTDSIDWAAYQAAINSGAPHVHAPGGHYVMNRGTLAERDIRYTGDGYATRVDFSLADGPGSCMLTQGELVQIGDLSVSVVKGARTLTFAAAPDLAPGDVVIVYNPANGSWLADRDPYRAGEMWKVHSVSGSTVTIYGNSSSVYLFSEVDVYRMRGVRVSVDQMHFSPSDTYSIAPFKVVFGDGVKVSNYYASDVTLYTGLEVERCFDVSINAVSSPNRSPAVNDEYGITISNCHNFSVYGGYAAATRHAVALGGMDAVCCVPNRHGLIYGMNIEGIDLASDISAGDMHGNADKITYDNCEFRNGVILQGRDATVRNSTVYGVSSTSGEAIYGSEVYGGTYTIENNRFISYGDGASFGIVHISPSSTQREALLIIARNNTFELPNATGSTKVFFLRGRNSPLPISANIDGVHVHMASVAMQCFLFADDSIKSELLSNYLIIDNVYGPFGTSLLYPTTKNANIPTRQMEQSGEVTVTTNGTSTALPASNVSFRYPYSKKPMAVACASGVNGVAFSSLGGQSPVPIVYAVVAASIRPGLVAATSSFTSGERAVVGWRAGIREI
Physico‐chemical
properties
protein length:747 AA
molecular weight: 80298,70030 Da
isoelectric point:5,31794
aromaticity:0,09772
hydropathy:-0,11767

Domains

Domains [InterPro]
DC_1559
ATT
1–174
DC_1559 IPR011050 DC_1729
IPR012334
STR
114–702
IPR012334
IPR049350
STR
252–340
IPR049350 IPR054136
YP_005098229.1
1 747
Architecture
ATT
STR
RBD
ATT 1-174 | STR 175-702 | RBD 703-747
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_005098229.1
1 747
Domain Start End Length (AA) Confidence
N-terminal 1 191 191 0,9929
Central domain 192 646 456 0,9900
C-terminal 647 747 100 0,9693
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-191
Central
192-646
C-terminal
647-747

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PMG1
[NCBI] 		2992927 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_005098229.1 [NCBI]
Genbank nucleotide accession
NC_016765 [NCBI]
CDS location
range 18680 -> 20923
strand +
CDS
ATGGACTACGATACCAGCGGTTTCCCGCTCGGCTCGAAAGACCCTCGCGTCTTGTACAAAAACGCCAAGAATTTCGACTATGCGATGAATGATCGCGAAAGCGTTTCGTGGGTTGACCGCTTCGGGGTATCTCGCAAGACTTGGTTCGGTGTCGAGCAGCAGGTAAATGACTACCTAGCATCTCAAGGATTCGAGCCAGGCGTCCTGGAGTACGTCGACGGCTCACCGCTGACCGTAGACCGTCCGACCCAACTGATCCAGCGCGGGGACAACATCTACAGCGTCAAGCGCCCGGCATCGTTCCCCGTCAATCTGACCGGGAACTGGGCGACGGACCAGAACCTCCTGGTTGCCCAGGTTGACCGGACGCTGCAAGACACCCTGGCCACCAGCGCTGGCGCCGGGATGATCGGCTATCGCGAGCGCACCGTAGCCGACCGCTTGAACGACACCGCCAATGTCAAGGACTACGGCGCTATCGCAGATGGGGCGTATCACCCGTTGTCAGAGCGGTTCGCTACGCTCGCCGAGGCGCAGGCGGTTTATCCGCACGCCACTGCGCTGACCGACAGTATCGACTGGGCGGCGTATCAGGCGGCAATCAACTCCGGGGCGCCGCATGTGCATGCGCCAGGCGGCCACTACGTCATGAATCGCGGAACTCTCGCTGAGCGGGATATTCGGTATACCGGCGATGGCTATGCTACCCGCGTAGATTTCAGCCTCGCAGATGGCCCAGGTAGCTGCATGCTGACGCAGGGTGAGCTTGTGCAAATCGGCGATCTGTCCGTGAGCGTGGTTAAAGGCGCTCGCACGCTGACATTTGCCGCTGCGCCAGACCTGGCTCCGGGCGACGTGGTCATCGTGTACAACCCCGCCAACGGATCTTGGCTGGCTGATCGCGATCCGTATCGCGCTGGCGAGATGTGGAAAGTCCATTCGGTAAGCGGTAGCACTGTCACGATCTACGGAAACAGCTCGTCGGTGTACCTGTTCTCCGAGGTAGACGTATACCGCATGCGCGGCGTTCGCGTGTCTGTCGATCAGATGCACTTTTCGCCGTCTGACACATATTCCATTGCGCCGTTCAAGGTGGTTTTCGGCGATGGAGTTAAGGTTTCCAACTACTACGCTAGCGATGTCACGCTTTACACAGGGCTAGAAGTAGAACGATGCTTTGACGTTTCGATCAATGCGGTTTCAAGCCCGAACAGATCGCCGGCAGTCAATGACGAATATGGGATTACTATCTCAAACTGCCATAACTTCTCGGTTTACGGCGGTTATGCGGCAGCAACCAGGCACGCTGTCGCGCTTGGCGGAATGGACGCTGTGTGCTGCGTTCCTAACCGTCACGGCCTGATATACGGGATGAACATTGAGGGGATCGACTTAGCGTCGGATATCAGCGCGGGAGACATGCACGGGAATGCCGACAAAATCACATACGACAACTGCGAGTTTCGGAATGGGGTAATTCTTCAAGGGCGCGACGCAACTGTTCGTAACAGCACTGTCTACGGAGTATCCAGCACTTCCGGCGAAGCGATCTATGGATCGGAAGTATACGGTGGCACCTACACCATCGAGAATAATCGATTTATCAGCTATGGCGATGGCGCATCGTTTGGCATCGTCCATATATCGCCAAGTTCCACTCAGCGCGAAGCATTGCTGATCATCGCGCGAAACAATACATTCGAGTTGCCGAACGCCACGGGGTCGACGAAAGTGTTTTTCCTGCGTGGACGCAATAGCCCGCTTCCGATTAGCGCAAACATTGACGGAGTACACGTCCATATGGCATCTGTCGCGATGCAATGTTTCCTATTCGCGGACGACAGCATCAAGTCTGAACTTCTTTCTAACTACCTTATTATTGACAATGTTTACGGGCCATTCGGAACATCATTGCTTTACCCGACAACCAAGAATGCGAACATTCCTACGCGTCAGATGGAGCAGAGTGGGGAAGTAACAGTTACCACTAACGGAACTTCAACGGCTCTGCCGGCTTCCAACGTCAGTTTCCGATATCCATACTCTAAGAAGCCAATGGCGGTAGCCTGCGCATCAGGCGTCAACGGGGTAGCATTTTCTAGCCTTGGGGGGCAATCCCCGGTGCCAATTGTGTACGCCGTTGTCGCTGCTTCTATCCGGCCTGGACTGGTTGCTGCAACCTCTTCTTTCACCTCCGGAGAGCGGGCGGTCGTTGGGTGGAGGGCGGGAATCAGGGAGATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ebdcfd7424b03297643a861ce020034e2d00d27d3f7c8fb63cbafab2e1357864
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8155
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50