Protein

View in Explore
Genbank accession
XWX29935.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MKYVNVKQDGYLGININQDTRVINGYVLSGGVGEQDIIIHESVLPYNFYDEFIVGKFKYYRETGEVIEDYNFTPPDIEDIVVEEPETVSKQEFDNLKSQFEEMQKLLEKLLGGK
Physico‐chemical
properties
protein length:114 AA
molecular weight: 13206,66210 Da
isoelectric point:4,39743
aromaticity:0,12281
hydropathy:-0,47719

Domains

Domains [InterPro]
DC_0295
STR
2–114
DC_0295
IPR021358
STR
13–76
IPR021358
XWX29935.1
1 114
Architecture
STR
STR 2-114
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_12
[NCBI] 		2815612 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mammaliicoccus vitulinus
[NCBI] 		71237 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX29935.1 [NCBI]
Genbank nucleotide accession
MZ417316.1 [NCBI]
CDS location
range 82222 -> 82566
strand +
CDS
TTGAAATATGTAAATGTAAAACAAGACGGTTACTTAGGTATTAACATTAATCAAGATACTAGAGTAATAAACGGATATGTGTTATCCGGTGGTGTAGGTGAGCAAGATATAATTATTCATGAAAGTGTTTTACCTTATAATTTCTATGATGAATTTATTGTAGGTAAGTTTAAGTATTATAGAGAGACAGGGGAAGTTATAGAGGACTATAACTTTACCCCTCCGGATATCGAGGACATAGTAGTAGAAGAACCGGAAACAGTATCTAAACAGGAATTTGACAATTTAAAAAGTCAATTTGAAGAGATGCAAAAATTATTAGAGAAACTATTAGGGGGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
05e8354ba2f86c5dc2558dcb08efc6dc9c13f6026bd437d8f86a2cb447f43ec7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8190
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank