Phage RBP Database

Genbank accession

XWX29935.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

Seq2Symm

C3 confidence 0,876

C3	0,876
C4	0,009
C2	0,003

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MKYVNVKQDGYLGININQDTRVINGYVLSGGVGEQDIIIHESVLPYNFYDEFIVGKFKYYRETGEVIEDYNFTPPDIEDIVVEEPETVSKQEFDNLKSQFEEMQKLLEKLLGGK

Physico‐chemical properties

protein length:	114 AA
molecular weight:	13206,66210 Da
isoelectric point:	4,39743
aromaticity:	0,12281
hydropathy:	-0,47719

Domain architecture

XWX29935.1

1 114 aa

STR 13–76 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR021358
STR

IPR021358

XWX29935.1

1114 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0295
STR

DC_0295

XWX29935.1

1114 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR021358	STR	DC_0822	13	76	InterPro cluster	Protein of unknown function DUF2977	Central	Low	Positional only	74 proteins / 74 hits

Proteins with similar domain architecture

Phage

Staphylococcus phage PG-2021_12 [NCBI] · taxon 2815612

Uroviricota Caudoviricetes Herelleviridae Staphylococcus phage PG-2021_12

Host

Mammaliicoccus vitulinus [NCBI] · taxon 71237

Bacillota Bacilli Caryophanales Staphylococcaceae Mammaliicoccus Mammaliicoccus vitulinus

Genbank protein accession

XWX29935.1 [NCBI]

Genbank nucleotide accession

MZ417316.1 [NCBI]

CDS location

range 82222 -> 82566
strand +

CDS

TTGAAATATGTAAATGTAAAACAAGACGGTTACTTAGGTATTAACATTAATCAAGATACTAGAGTAATAAACGGATATGTGTTATCCGGTGGTGTAGGTGAGCAAGATATAATTATTCATGAAAGTGTTTTACCTTATAATTTCTATGATGAATTTATTGTAGGTAAGTTTAAGTATTATAGAGAGACAGGGGAAGTTATAGAGGACTATAACTTTACCCCTCCGGATATCGAGGACATAGTAGTAGAAGAACCGGAAACAGTATCTAAACAGGAATTTGACAATTTAAAAAGTCAATTTGAAGAGATGCAAAAATTATTAGAGAAACTATTAGGGGGTAAATAA

Title	Authors	Date	PMID	Source
Natural phage communities crosslink different species within the genus Staphylococcus	Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E.	2024	—	GenBank

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Literature