Phage RBP Database

Genbank accession

YP_007007152.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,53

Seq2Symm

C3 confidence 0,974

C3	0,974
I	0,019
C5	0,005

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MGTKLERKHFKLFGKDTVAERIMQIGSLRAGTPVQSKDPDVLQALPNYLEGWPAIVMADNAPAMEDMGALQFVFAYMIATIMEQGVPEWNSATEYFIGSVVSYQGKLYRSVIDENLNNAVAVGTAWVPLSSESVKNVNAQDTYTVINTDSYLRVNAVGSTANLTTVTLPSLADVALGFKVTIKNSAEALSSATVKVVVDDAGTESMDGMVDIDLLSGPPVNESITLVKGSATRWDVI

Physico‐chemical properties

protein length:	237 AA
molecular weight:	25456,67500 Da
isoelectric point:	4,54760
aromaticity:	0,07173
hydropathy:	0,08608

Domain architecture

YP_007007152.1

1 237 aa

ATT 86–133 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

G3DSA:2.10.10.20
ATT

G3DSA:2.10.10.20

YP_007007152.1

1237 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1912
STR

DC_1912

YP_007007152.1

1237 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:2.10.10.20	ATT	G3DSA:2.10.10.20	86	133	Merged direct domain	G3DSA:2.10.10.20	N-terminal	Low	Positional only	19 proteins / 19 hits

Proteins with similar domain architecture

Phage

Bdellovibrio phage phi1422 [NCBI] · taxon 1127515

Uroviricota Caudoviricetes Bdellovibrio phage phi1422

Host

Bdellovibrio bacteriovorus [NCBI] · taxon 959

Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus

Genbank protein accession

YP_007007152.1 [NCBI]

Genbank nucleotide accession

NC_019525.1 [NCBI]

CDS location

range 43436 -> 44149
strand +

CDS

ATGGGAACAAAACTTGAGCGAAAGCATTTTAAGCTTTTCGGAAAAGATACAGTAGCGGAAAGAATTATGCAGATCGGGTCTCTGCGCGCGGGAACTCCTGTTCAATCAAAGGACCCTGATGTTCTCCAGGCATTGCCAAACTATCTTGAAGGTTGGCCCGCTATCGTTATGGCCGACAATGCTCCAGCGATGGAGGATATGGGTGCGCTTCAATTTGTTTTTGCATACATGATTGCGACAATCATGGAGCAAGGTGTTCCCGAGTGGAACTCGGCGACTGAATATTTCATCGGCTCCGTTGTGTCCTACCAAGGAAAGCTCTACAGATCAGTGATCGACGAGAACTTGAATAATGCAGTCGCAGTAGGAACGGCATGGGTTCCGCTATCATCCGAATCAGTGAAAAACGTAAATGCGCAAGATACTTACACCGTTATCAACACGGATTCTTATTTGCGCGTCAATGCAGTTGGCTCAACTGCGAATCTGACAACGGTAACTCTTCCATCTCTTGCTGATGTTGCTCTCGGATTCAAAGTTACGATCAAGAACTCAGCAGAAGCATTGAGTTCCGCAACGGTGAAAGTTGTTGTTGACGACGCTGGGACAGAATCAATGGATGGAATGGTTGATATTGATTTGCTATCTGGACCTCCAGTGAACGAATCAATCACTTTGGTAAAAGGCTCCGCAACAAGATGGGATGTGATCTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)