Protein

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Genbank accession
ADO98413.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTLPVQNVKTPSYGSAISKIRPDCVWIIYENDLSTLEWSSENTLPRPTDAEIIAELDSQMTAFNAKQYQRDRQPEYPDLKSQLDMLYHDIKDGKLDSGTWIAAVEAVKAKHPKP
Physico‐chemical
properties
protein length:114 AA
molecular weight: 12964,49440 Da
isoelectric point:5,07501
aromaticity:0,07895
hydropathy:-0,63596

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-RSM4
[NCBI] 		444862 Uroviricota > Caudoviricetes > Pantevenvirales > Thaumasvirus > Thaumasvirus stim4
Host Prochlorococcus marinus str. MIT 9303
[NCBI] 		59922 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADO98413.1 [NCBI]
Genbank nucleotide accession
GU071099.1 [NCBI]
CDS location
range 17884 -> 18228
strand +
CDS
ATGACACTTCCAGTTCAAAACGTTAAAACTCCATCTTACGGTTCTGCAATTTCAAAGATAAGACCTGATTGTGTATGGATTATCTATGAAAATGATCTGTCAACTCTTGAGTGGTCTTCTGAAAATACATTGCCTAGACCTACTGATGCTGAAATCATTGCCGAACTTGACAGTCAAATGACTGCTTTCAATGCTAAACAATATCAACGTGATAGACAACCTGAGTATCCAGATTTGAAATCACAGTTAGACATGTTGTATCATGACATCAAGGACGGTAAGTTAGATAGTGGCACATGGATTGCAGCAGTTGAAGCAGTAAAAGCAAAACATCCTAAACCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5089b736538f9f36e48efc16a06dd9a119766e95f02363b65ce55f01d73c71c2
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9306
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage 9303-10a Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank