Phage RBP Database

Genbank accession

AAL86890.2 [GenBank]

Protein name

tail spike protein

RBP type

TF

Evidence GenBank

Probability 1,00

TSP

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,99

Seq2Symm

C3 confidence 0,999

C3	0,999
C1	0,514
C2	0,004

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MSLTKPRCFRKASYLSQLGTLQNLANTGDDVLVIDVDYKFTNGETVDFKGRLVRIECEARFIGDGALIFTNMASGSVVEKPFMESKSTPWVIYPWTEDGKWITDAQAVAATLKQSKTEGYQPGVNDWVKFPGLEALIPQEVKDQYVVSTLDIRDCVGVEVRRAGGLMAAYLFRNCHHCKVIDSDTIIGGKDGIITFENLGGEWGIGNYAIGGRVHYGSCSGVQFLRNNGGASHNGGVIGVTSWRAGESGFKTWQGSVGAGTSRNYNLQFRDSVALSPVWDGFDLGSDPGMAPEEDRPGDLPVSQYPMHQLPNNHMVDNILVMNSLGVGLGMDGRGGYVSNVTVQDCAGAGILAHAFNRTFSNITVIDCNYMNFDSDQIIIIGDCIVNGIRAAGIKPQPSKGMIISAPHSTLSGIVGNVPPDRILAGNILDPVLGHTRINGFNSDSAELSFRIHKLTKTLDSGAIRSTLNGGPGTGSAWTEMTAISGSAPNAVSLKINRGDFKATEIPVAPTVLPDEAVRDHSSIALYFDQEALWALVKKPNGSLTRMKLA

Physico‐chemical properties

protein length:	550 AA
molecular weight:	59079,22490 Da
isoelectric point:	5,80488
aromaticity:	0,07818
hydropathy:	-0,12073

Domain architecture

AAL86890.2

1 550 aa

STR 1–550

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR011050
STR

IPR011050

IPR012332
STR

IPR012332

IPR015331
RBD

IPR015331

AAL86890.2

1550 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR011050	STR	IPR011050	1	550	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR012332	STR	IPR012332	2	550	Merged direct domain	Autotransporter, pectate lyase C-like domain superfamily	Central	Low	Positional only	199 proteins / 199 hits
IPR015331	RBD	DC_0844	3	550	InterPro cluster	P22 tailspike C-terminal domain	Central	High	Text match	401 proteins / 403 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

AAL86890.2

1 550 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	30	30	0,9430
Central domain	31	444	415	0,9841
C-terminal	445	550	105	0,9260

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Enterobacteria phage SP6 [NCBI] · taxon 2907955

Uroviricota Caudoviricetes Autographivirales Autosignataviridae Zindervirus Zindervirus SP6

Host

Salmonella [NCBI] · taxon 590

Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Salmonella

No CDS data available.

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)