Protein

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Genbank accession
AAL86890.2 [GenBank]
Protein name
putative tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TSP
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MSLTKPRCFRKASYLSQLGTLQNLANTGDDVLVIDVDYKFTNGETVDFKGRLVRIECEARFIGDGALIFTNMASGSVVEKPFMESKSTPWVIYPWTEDGKWITDAQAVAATLKQSKTEGYQPGVNDWVKFPGLEALIPQEVKDQYVVSTLDIRDCVGVEVRRAGGLMAAYLFRNCHHCKVIDSDTIIGGKDGIITFENLGGEWGIGNYAIGGRVHYGSCSGVQFLRNNGGASHNGGVIGVTSWRAGESGFKTWQGSVGAGTSRNYNLQFRDSVALSPVWDGFDLGSDPGMAPEEDRPGDLPVSQYPMHQLPNNHMVDNILVMNSLGVGLGMDGRGGYVSNVTVQDCAGAGILAHAFNRTFSNITVIDCNYMNFDSDQIIIIGDCIVNGIRAAGIKPQPSKGMIISAPHSTLSGIVGNVPPDRILAGNILDPVLGHTRINGFNSDSAELSFRIHKLTKTLDSGAIRSTLNGGPGTGSAWTEMTAISGSAPNAVSLKINRGDFKATEIPVAPTVLPDEAVRDHSSIALYFDQEALWALVKKPNGSLTRMKLA
Physico‐chemical
properties
protein length:550 AA
molecular weight: 59079,22490 Da
isoelectric point:5,80488
aromaticity:0,07818
hydropathy:-0,12073

Domains

Domains [InterPro]
IPR011050
1–550
IPR011050
IPR012332
2–550
IPR012332
IPR015331
3–550
IPR015331
AAL86890.2
1 550
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SP6
[NCBI] 		2907955 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAL86890.2 [NCBI]
Genbank nucleotide accession
AY370673 [NCBI]
CDS location
range 40011 -> 41663
strand +
CDS
ATGTCATTAACTAAACCACGTTGCTTCAGGAAGGCAAGTTATCTAAGCCAGTTAGGCACTTTGCAGAATCTGGCTAACACTGGAGATGACGTACTTGTTATCGATGTTGACTACAAGTTCACCAATGGAGAGACTGTAGACTTCAAAGGTCGATTGGTTCGTATAGAATGCGAAGCTAGATTCATAGGCGATGGAGCTTTAATTTTCACTAATATGGCTAGTGGTTCTGTAGTAGAAAAGCCTTTCATGGAGAGCAAGTCCACACCTTGGGTTATCTACCCTTGGACAGAAGATGGCAAGTGGATTACAGATGCACAAGCTGTTGCTGCTACGCTTAAACAATCTAAGACCGAAGGATATCAACCTGGAGTCAATGATTGGGTCAAGTTCCCAGGACTTGAAGCATTGATACCGCAAGAGGTGAAAGACCAGTATGTAGTATCAACACTGGACATCCGTGATTGTGTAGGTGTTGAGGTTAGACGTGCTGGTGGGCTTATGGCAGCTTACTTGTTCCGCAACTGTCATCATTGTAAGGTAATTGATTCTGACACCATCATTGGTGGTAAAGACGGCATCATAACCTTTGAAAACTTAGGTGGTGAATGGGGTATCGGCAACTATGCCATAGGTGGTCGTGTACATTATGGCTCATGTAGTGGTGTGCAGTTTCTTCGGAACAATGGAGGTGCATCACATAATGGTGGAGTTATTGGTGTGACCTCATGGCGCGCAGGTGAGTCTGGGTTTAAAACATGGCAAGGTTCTGTAGGTGCAGGTACATCTCGTAACTATAACCTTCAGTTCCGTGACTCAGTTGCATTATCTCCAGTATGGGACGGCTTTGACTTAGGCTCAGACCCTGGAATGGCACCAGAAGAGGATAGACCGGGAGATTTACCTGTATCTCAATACCCCATGCACCAGTTACCTAATAACCACATGGTTGATAACATACTTGTTATGAACTCATTAGGTGTAGGTTTAGGTATGGACGGTAGAGGTGGTTATGTGTCGAATGTTACCGTGCAGGATTGTGCAGGCGCAGGTATACTTGCTCATGCATTCAACCGTACCTTCTCTAACATTACGGTGATTGACTGCAACTACATGAACTTCGATTCAGACCAGATAATCATCATTGGTGACTGCATCGTGAATGGCATCCGAGCAGCGGGTATTAAGCCTCAGCCATCCAAAGGCATGATCATCAGTGCACCTCACTCAACCTTGAGCGGTATTGTGGGTAATGTGCCGCCAGACCGTATTCTTGCAGGTAACATCCTTGACCCTGTGTTGGGTCATACAAGGATTAATGGGTTTAATAGTGACTCGGCGGAACTGAGCTTCAGAATCCACAAGCTTACCAAGACCTTGGATAGTGGTGCTATTCGCTCTACGCTGAACGGTGGGCCGGGTACTGGTTCTGCATGGACTGAGATGACTGCAATTTCAGGGTCAGCTCCAAATGCTGTCTCGTTGAAGATTAACCGAGGAGACTTCAAGGCAACTGAGATACCAGTAGCACCTACTGTGCTTCCAGATGAAGCGGTAAGAGACCACAGCTCTATCGCACTTTATTTTGATCAGGAAGCTCTTTGGGCTTTAGTTAAGAAGCCGAACGGAAGCCTCACACGAATGAAGCTTGCTTAA

Tertiary structure

PDB ID
5f9574d82611fc1fad137d1ed2283c4bd497e8091961919fd467f193db4955ff
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7066
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A domain of the gene 4 helicase/primase of bacteriophage T7 required for the formation of an active hexamer Notarnicola,S.M., Park,K., Griffith,J.D. and Richardson,C.C. 1995 7650041 GenBank