Protein

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Genbank accession
YP_013605877.1 [GenBank]
Protein name
receptor binding protein
RBP type
TSP
Evidence DepoScope
Probability 0,98
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MGFFAGKYSDGKTVLSLNTESGGDINRHYSPNNNSIFHSDMPFVLVDGTYEAGLGDAGNGFFVCQMPPDIINIKSNDPGRVILTAIEINGTHRAFLNGTQSKVGQTIVATQADPFRSFASVSQTSGFAFGNSLASGTYNYNPSIGHEESISRSGTGGTTLHSTYHGIVRPGAGAPVGVTVAEAFAQLGFPTNSSTVPVDGNNPYYWDPGWMSPLGAAHRGHDWFYVCNSNIRGYGGVRQGLPGNVNTMYHDGGNRFVCRGSTTNLANQSGNPTVIQDWYNITPTKVIWYVLNLRYSNGGMSISGNPFTGSDILISPSNFIIKGVNLPNTGYKFINQNAFGNLGYRPDMEFIGNNAAYTGVFGDTTARCELVGSSNGGLWSPVDYGGAKSQISIYKFGVGKQWYVNSNDNTIGNEHGVVWGPSAVPLRLFGGNVGSSYMGDDITPSYPGTGDRYVGLSTIGLGIPGGNATVILTTEVISGNLNCAGVPANTWNNGVFQVQGRRAYSYSGGDAIFHQILTLPVGYLVPFHTTSAFRYTPNNALSRNSFIYTVKNLGNGNVELGVVMHVSLGSAVFLPRLRVTVQRLT
Physico‐chemical
properties
protein length:585 AA
molecular weight: 62404,78430 Da
isoelectric point:7,69267
aromaticity:0,11282
hydropathy:-0,16291

Domains

Domains [InterPro]
IPR059609
RBD
1–585
IPR059609
YP_013605877.1
1 585
Architecture
RBD
RBD 1-585
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_013605877.1
1 585
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,2042
Central domain 11 209 200 0,5897
C-terminal 210 585 375 0,8559
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-585

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage T5_ev219
[NCBI] 		2742947 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus ev219
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_013605877.1 [NCBI]
Genbank nucleotide accession
NC_134263 [NCBI]
CDS location
range 107721 -> 109478
strand -
CDS
ATGGGTTTTTTCGCTGGAAAGTATAGCGATGGTAAGACCGTACTATCTTTAAATACTGAATCTGGGGGTGACATTAATCGTCACTATAGTCCAAATAATAATAGTATTTTTCATAGTGATATGCCATTTGTTCTAGTTGATGGTACTTATGAGGCAGGATTAGGTGATGCCGGGAATGGGTTTTTCGTATGTCAGATGCCTCCTGATATAATAAATATTAAATCTAATGATCCTGGTAGAGTTATACTAACTGCTATTGAAATTAATGGTACTCACAGAGCTTTTCTTAACGGTACTCAGAGTAAAGTTGGTCAAACTATAGTTGCCACTCAGGCAGATCCCTTTAGATCTTTTGCTAGTGTTTCTCAAACCAGTGGATTTGCATTTGGTAACAGCCTCGCATCTGGAACTTATAATTATAACCCCTCGATAGGGCACGAAGAATCTATCTCTAGGAGTGGCACAGGTGGTACTACGTTACATAGTACCTACCACGGTATAGTTAGGCCCGGTGCGGGAGCTCCTGTAGGTGTTACTGTTGCAGAAGCCTTTGCACAATTAGGTTTTCCTACTAATAGTAGCACAGTACCTGTAGATGGCAATAACCCGTACTATTGGGATCCTGGATGGATGTCGCCTCTAGGAGCAGCACATAGAGGGCATGATTGGTTTTATGTTTGCAATTCTAATATACGTGGGTATGGTGGGGTTAGGCAAGGGCTCCCAGGTAATGTAAATACTATGTACCACGACGGCGGGAACAGATTTGTTTGTAGGGGATCTACTACTAATCTGGCCAATCAGTCTGGCAACCCTACAGTAATACAGGATTGGTATAATATAACTCCTACTAAGGTTATTTGGTATGTTCTTAATTTAAGGTACTCGAATGGTGGTATGAGTATTTCCGGCAACCCCTTTACTGGTTCTGATATTCTTATATCTCCTTCTAATTTCATAATTAAAGGGGTGAATCTCCCTAATACCGGGTATAAGTTTATTAACCAGAATGCTTTTGGTAACTTAGGCTATAGGCCAGATATGGAATTCATCGGAAATAACGCAGCGTATACCGGGGTTTTTGGTGATACCACGGCAAGATGTGAACTTGTAGGGTCTAGTAATGGAGGGTTGTGGTCTCCTGTAGACTATGGTGGAGCTAAATCACAGATTAGCATTTATAAGTTCGGAGTAGGTAAACAGTGGTATGTAAACTCTAACGATAATACTATTGGTAACGAGCATGGAGTTGTTTGGGGACCCTCAGCAGTTCCACTGCGACTTTTTGGTGGAAATGTAGGTAGCTCTTATATGGGAGATGATATTACTCCCAGCTACCCAGGAACGGGTGATAGATACGTTGGTTTATCAACTATTGGGCTGGGTATACCAGGCGGAAATGCTACAGTAATTCTTACTACTGAAGTTATATCAGGTAATCTTAATTGTGCGGGTGTTCCAGCTAATACATGGAATAATGGTGTGTTTCAAGTGCAAGGAAGAAGAGCATATAGCTATAGCGGCGGGGATGCAATATTCCACCAGATTTTAACGCTACCTGTGGGCTATCTAGTACCGTTTCATACTACATCTGCTTTTAGATATACACCTAACAATGCTCTAAGTAGAAACAGTTTTATATACACTGTTAAAAATTTAGGAAATGGAAATGTAGAGTTAGGGGTAGTTATGCACGTGAGTTTGGGTAGTGCAGTTTTCCTACCTAGATTAAGAGTAACAGTTCAACGCCTTACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ca33e9fc1bb5436baa7915428134d23db035f86c7906facee8fe298928933d55
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2396
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50