Protein

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Genbank accession
QEI24166.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANKPTQPLFPLGLETSESSNIKGFNNSGTIEHSPGAVMTFPEDTEVTGLPSSVRYNPDSDEFEGYYENGGWLSLGGGGIRWETLPHAPSSNLLEGRGYLINNTTGTSTVVLPSPTHIGDSVTICDAYGKFATYPLTVSPSGNNLYGSTEDMAITTDNVSATFTWSGPEQGWVITSGVGLGQGRVYSREIFTQILASETSAVTLNTPPTIVDVYADGKRLAESKYSLDGNVITFSPSLPASTELQVIEYTPIQLGNGGGSGSSTITWVYNGGSAIGGETEITLDIVVDDVPAIDINGSRQYKNMGFTFDPLTSKITLAQELDAEDEVVVIINGTPNIYNQIDYTLREVARVTNVKDTEVVYFSVGAVLSGYKVIYDKVTQRSYFIPELPTGTTAVSLSSSAVLVHSAGSVDLGALAVSREEYVTLSGTFDSGAVINVKNELLTHTDGKYRWDGEFPKIVPDGSTPATTGGVGVGAWISVGDASLRTQLANGNGSLIGVHPHGTLNNVLTVRTPEQYNAVGDGIADDTSKLKEMLSDINNVPETLPDAAAVNSYMEQVAVKINLTKLYRFTETLYIPPGVSIEMPAPNFFTRECKQGLFYDPVDKNTAAISLMVYRKQPDGSYKLNKDVDYYPTGLDIDNGDAITCARKIDISNLNLITAPGVKVGVKWIGGAGCTTKGLSIGENTGSDITTARLPRVGLLQSASWGSVHENLRILYKTQGAVFIDSNGGAAVNNAYISRLGNTNGELEQAVYKPEGFTEVGDVAITQFAGSEVKFNNPIIEQASFDFVHAGRDTDSYGLFMVDKPHIESSGGKKKHSFYLINTSSDVTLSGVGLSGQDPDLDSMYFLKNCPETARNVVRGQMPVGGVKLVRGTGNYPTLVLDCTNMGSQFQFGEVGDIFYIKDVVGVKADTLYIDPVNGNNYNWGFNGTKPIRELLNISKLCQLFKCKSVYLNPGEIAITSNTELPMVNFEGTGSLKANSGSSFLIKTGGTLSLIGLAGISTDGGHMFRVSTREKVNIHTNCPVDSGAAYVVLSEVQGNIEYRQLFYSVNCSKYVGATASQTVAGVMVKTATRPTGIDAAPVDGNVSLSYKIIES
Physico‐chemical
properties
protein length:1095 AA
molecular weight: 116988,72190 Da
isoelectric point:4,82787
aromaticity:0,08402
hydropathy:-0,13132

Domains

Domains [InterPro]
DC_1064
ATT
4–187
DC_1064 DC_0018 G3DSA:2.160.20.130
G3DSA:3.30.2020.50
ATT
335–420
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR012334
IPR040775
RBD
416–481
IPR040775
QEI24166.1
1 1095
Architecture
ATT
ATT
STR
RBD
ATT 4-187 | ATT 298-580 | STR 581-908 | RBD 909-1095
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QEI24166.1
1 1095
Domain Start End Length (AA) Confidence
N-terminal 1 527 527 0,9951
Central domain 528 1024 498 0,9698
C-terminal 1025 1095 70 0,9349
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-527
Central
528-1024
C-terminal
1025-1095

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SS9
[NCBI] 		2592220 Uroviricota > Caudoviricetes > Pantevenvirales > Cvivirinae > Kuttervirus
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEI24166.1 [NCBI]
Genbank nucleotide accession
MK972699.1 [NCBI]
CDS location
range 80 -> 3367
strand -
CDS
ATGGCCAACAAACCAACACAGCCTCTTTTCCCTTTGGGTTTAGAAACTTCTGAGTCTTCGAACATAAAAGGCTTCAACAACTCCGGCACTATTGAGCATTCCCCTGGTGCCGTAATGACATTTCCTGAAGATACTGAAGTTACAGGTCTTCCATCTTCTGTACGTTACAATCCTGATAGCGATGAATTTGAAGGTTATTACGAAAACGGTGGTTGGCTGTCTTTGGGGGGCGGTGGAATACGCTGGGAAACGCTCCCTCACGCTCCCTCTAGCAATTTGTTAGAAGGTCGTGGCTATCTCATTAATAATACCACAGGGACATCTACAGTGGTTCTCCCTTCCCCTACGCATATTGGGGATTCCGTTACTATTTGTGATGCTTATGGGAAATTTGCCACTTACCCATTGACCGTGTCTCCTTCTGGAAATAATTTGTATGGTTCCACTGAAGACATGGCTATAACAACTGATAATGTTTCAGCAACGTTCACTTGGTCTGGACCTGAACAAGGTTGGGTTATCACATCCGGCGTCGGTCTTGGTCAAGGCCGTGTCTACAGTCGTGAAATCTTTACACAAATTTTGGCGTCTGAAACAAGTGCTGTCACTCTCAATACTCCACCAACAATCGTGGACGTGTATGCTGACGGAAAACGTCTTGCGGAATCCAAATATTCATTAGATGGGAATGTAATCACTTTCAGTCCTTCTTTGCCAGCCAGCACTGAATTGCAGGTAATAGAATATACTCCTATTCAATTGGGTAATGGCGGTGGTTCTGGTTCTTCTACGATTACCTGGGTCTATAATGGGGGTTCAGCGATTGGCGGTGAAACCGAAATCACGTTAGACATCGTTGTTGATGATGTTCCGGCCATTGATATAAACGGAAGTCGCCAGTATAAAAATATGGGGTTCACATTCGATCCATTAACCAGTAAAATCACTCTTGCACAAGAACTGGATGCAGAGGATGAAGTTGTTGTAATTATCAATGGAACGCCAAACATCTATAATCAAATTGATTATACTTTGCGGGAAGTGGCTCGTGTAACCAATGTTAAAGATACAGAGGTCGTTTATTTTAGTGTTGGTGCTGTGTTAAGCGGGTATAAAGTTATCTATGATAAAGTAACACAGAGATCATATTTTATTCCAGAGTTACCGACTGGAACCACGGCAGTCAGCCTTAGTTCTTCGGCTGTGCTTGTGCATTCTGCTGGTAGTGTTGATCTGGGCGCATTAGCTGTATCTCGTGAAGAATACGTAACATTGTCTGGGACATTTGATTCTGGTGCTGTCATCAATGTTAAAAATGAATTACTCACCCACACGGATGGTAAGTATCGCTGGGATGGGGAATTCCCCAAAATCGTTCCGGATGGTTCAACTCCGGCGACAACAGGCGGCGTTGGTGTTGGCGCATGGATTAGTGTTGGTGATGCCTCATTGAGAACACAACTGGCAAACGGTAATGGATCGTTGATTGGAGTTCATCCGCACGGGACGCTAAATAATGTATTAACTGTACGCACACCTGAACAGTACAATGCGGTAGGCGACGGAATAGCTGACGATACTTCAAAATTAAAAGAAATGCTTTCAGACATAAACAACGTTCCTGAAACACTTCCTGATGCTGCGGCTGTAAACTCGTACATGGAGCAAGTAGCAGTAAAAATTAACCTGACCAAGTTATACCGTTTCACAGAGACGCTATACATACCTCCAGGTGTTTCAATTGAAATGCCTGCACCAAACTTTTTTACTCGTGAGTGTAAGCAAGGATTGTTTTATGACCCAGTAGATAAGAATACAGCAGCAATCAGCTTAATGGTGTACCGTAAACAGCCTGATGGTTCATACAAACTCAATAAAGATGTAGATTATTATCCTACTGGGTTAGATATTGATAATGGGGACGCTATAACATGTGCCAGAAAAATTGATATTAGTAACCTTAACCTGATTACAGCACCAGGTGTAAAGGTTGGTGTTAAATGGATAGGTGGGGCAGGTTGCACTACAAAAGGGTTATCCATTGGGGAGAATACAGGGAGCGATATTACAACAGCAAGACTGCCAAGAGTAGGATTGTTGCAGTCAGCATCATGGGGTTCTGTTCATGAAAATCTACGTATCCTGTATAAAACTCAGGGCGCAGTGTTCATTGACTCTAATGGCGGTGCTGCTGTAAACAATGCTTACATTTCTCGCCTTGGTAATACTAATGGTGAGTTGGAACAAGCAGTGTATAAACCCGAAGGATTTACTGAGGTAGGCGATGTTGCTATCACACAGTTTGCAGGTTCCGAGGTTAAGTTTAACAACCCAATCATCGAACAAGCATCTTTCGACTTTGTTCACGCTGGTCGAGATACTGATTCCTATGGTTTATTTATGGTTGATAAACCCCATATTGAGTCATCTGGCGGGAAGAAAAAACATAGTTTCTATCTTATCAATACCAGTTCGGATGTTACGTTGTCAGGAGTGGGTCTTTCAGGACAAGACCCTGATCTAGATAGTATGTACTTCCTTAAAAACTGCCCAGAAACTGCCAGAAATGTTGTCAGGGGACAAATGCCAGTAGGTGGTGTAAAACTCGTTAGGGGTACTGGTAATTACCCTACATTGGTACTCGACTGTACAAACATGGGAAGCCAATTTCAATTTGGGGAAGTTGGTGACATTTTCTACATCAAAGATGTTGTTGGCGTAAAAGCAGACACTCTATACATAGATCCTGTAAATGGTAATAACTACAACTGGGGATTTAACGGAACCAAACCTATAAGAGAGCTACTTAATATTTCAAAGTTATGCCAGCTATTCAAGTGCAAAAGCGTTTATCTTAATCCAGGTGAGATAGCCATTACCTCTAACACAGAGTTGCCGATGGTTAATTTTGAAGGTACTGGTAGCTTGAAAGCAAATTCTGGTAGTAGCTTCCTTATCAAAACCGGTGGGACATTATCATTAATTGGGCTTGCTGGTATATCTACAGATGGCGGCCATATGTTTAGAGTCTCCACCAGGGAAAAAGTAAACATACATACTAACTGCCCAGTGGATTCTGGTGCGGCCTATGTTGTTCTAAGTGAGGTTCAAGGTAATATTGAATACAGGCAATTGTTTTATTCTGTAAATTGTTCTAAGTATGTAGGTGCAACTGCGAGTCAAACTGTCGCTGGTGTCATGGTTAAGACCGCAACAAGACCGACAGGAATCGATGCTGCTCCAGTTGATGGTAATGTTTCTCTATCCTATAAAATTATAGAATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
78bd6ccf0aded6cd54d5e461f8acf1752f92498157cb91fe2cb43370c10d1802
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7106
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Salmonella bacteriophage diversity and host specificity revealed by physiological characterization and whole genome sequencing Fong,K., Tremblay,D., Delaquis,P., Moineau,S., Goodridge,L., Levesque,R. and Wang,S. 2019-09-14 — GenBank