Protein

View in Explore
Genbank accession
QEI24166.1 [GenBank]
Protein name
tail fibers protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANKPTQPLFPLGLETSESSNIKGFNNSGTIEHSPGAVMTFPEDTEVTGLPSSVRYNPDSDEFEGYYENGGWLSLGGGGIRWETLPHAPSSNLLEGRGYLINNTTGTSTVVLPSPTHIGDSVTICDAYGKFATYPLTVSPSGNNLYGSTEDMAITTDNVSATFTWSGPEQGWVITSGVGLGQGRVYSREIFTQILASETSAVTLNTPPTIVDVYADGKRLAESKYSLDGNVITFSPSLPASTELQVIEYTPIQLGNGGGSGSSTITWVYNGGSAIGGETEITLDIVVDDVPAIDINGSRQYKNMGFTFDPLTSKITLAQELDAEDEVVVIINGTPNIYNQIDYTLREVARVTNVKDTEVVYFSVGAVLSGYKVIYDKVTQRSYFIPELPTGTTAVSLSSSAVLVHSAGSVDLGALAVSREEYVTLSGTFDSGAVINVKNELLTHTDGKYRWDGEFPKIVPDGSTPATTGGVGVGAWISVGDASLRTQLANGNGSLIGVHPHGTLNNVLTVRTPEQYNAVGDGIADDTSKLKEMLSDINNVPETLPDAAAVNSYMEQVAVKINLTKLYRFTETLYIPPGVSIEMPAPNFFTRECKQGLFYDPVDKNTAAISLMVYRKQPDGSYKLNKDVDYYPTGLDIDNGDAITCARKIDISNLNLITAPGVKVGVKWIGGAGCTTKGLSIGENTGSDITTARLPRVGLLQSASWGSVHENLRILYKTQGAVFIDSNGGAAVNNAYISRLGNTNGELEQAVYKPEGFTEVGDVAITQFAGSEVKFNNPIIEQASFDFVHAGRDTDSYGLFMVDKPHIESSGGKKKHSFYLINTSSDVTLSGVGLSGQDPDLDSMYFLKNCPETARNVVRGQMPVGGVKLVRGTGNYPTLVLDCTNMGSQFQFGEVGDIFYIKDVVGVKADTLYIDPVNGNNYNWGFNGTKPIRELLNISKLCQLFKCKSVYLNPGEIAITSNTELPMVNFEGTGSLKANSGSSFLIKTGGTLSLIGLAGISTDGGHMFRVSTREKVNIHTNCPVDSGAAYVVLSEVQGNIEYRQLFYSVNCSKYVGATASQTVAGVMVKTATRPTGIDAAPVDGNVSLSYKIIES
Physico‐chemical
properties
protein length:1095 AA
molecular weight: 116988,72190 Da
isoelectric point:4,82787
aromaticity:0,08402
hydropathy:-0,13132

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
335–420
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR012334 G3DSA:2.160.20.130
IPR040775
416–481
IPR040775
QEI24166.1
1 1095
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SS9
[NCBI] 		2592220 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEI24166.1 [NCBI]
Genbank nucleotide accession
MK972699.1 [NCBI]
CDS location
range 80 -> 3367
strand -
CDS
ATGGCCAACAAACCAACACAGCCTCTTTTCCCTTTGGGTTTAGAAACTTCTGAGTCTTCGAACATAAAAGGCTTCAACAACTCCGGCACTATTGAGCATTCCCCTGGTGCCGTAATGACATTTCCTGAAGATACTGAAGTTACAGGTCTTCCATCTTCTGTACGTTACAATCCTGATAGCGATGAATTTGAAGGTTATTACGAAAACGGTGGTTGGCTGTCTTTGGGGGGCGGTGGAATACGCTGGGAAACGCTCCCTCACGCTCCCTCTAGCAATTTGTTAGAAGGTCGTGGCTATCTCATTAATAATACCACAGGGACATCTACAGTGGTTCTCCCTTCCCCTACGCATATTGGGGATTCCGTTACTATTTGTGATGCTTATGGGAAATTTGCCACTTACCCATTGACCGTGTCTCCTTCTGGAAATAATTTGTATGGTTCCACTGAAGACATGGCTATAACAACTGATAATGTTTCAGCAACGTTCACTTGGTCTGGACCTGAACAAGGTTGGGTTATCACATCCGGCGTCGGTCTTGGTCAAGGCCGTGTCTACAGTCGTGAAATCTTTACACAAATTTTGGCGTCTGAAACAAGTGCTGTCACTCTCAATACTCCACCAACAATCGTGGACGTGTATGCTGACGGAAAACGTCTTGCGGAATCCAAATATTCATTAGATGGGAATGTAATCACTTTCAGTCCTTCTTTGCCAGCCAGCACTGAATTGCAGGTAATAGAATATACTCCTATTCAATTGGGTAATGGCGGTGGTTCTGGTTCTTCTACGATTACCTGGGTCTATAATGGGGGTTCAGCGATTGGCGGTGAAACCGAAATCACGTTAGACATCGTTGTTGATGATGTTCCGGCCATTGATATAAACGGAAGTCGCCAGTATAAAAATATGGGGTTCACATTCGATCCATTAACCAGTAAAATCACTCTTGCACAAGAACTGGATGCAGAGGATGAAGTTGTTGTAATTATCAATGGAACGCCAAACATCTATAATCAAATTGATTATACTTTGCGGGAAGTGGCTCGTGTAACCAATGTTAAAGATACAGAGGTCGTTTATTTTAGTGTTGGTGCTGTGTTAAGCGGGTATAAAGTTATCTATGATAAAGTAACACAGAGATCATATTTTATTCCAGAGTTACCGACTGGAACCACGGCAGTCAGCCTTAGTTCTTCGGCTGTGCTTGTGCATTCTGCTGGTAGTGTTGATCTGGGCGCATTAGCTGTATCTCGTGAAGAATACGTAACATTGTCTGGGACATTTGATTCTGGTGCTGTCATCAATGTTAAAAATGAATTACTCACCCACACGGATGGTAAGTATCGCTGGGATGGGGAATTCCCCAAAATCGTTCCGGATGGTTCAACTCCGGCGACAACAGGCGGCGTTGGTGTTGGCGCATGGATTAGTGTTGGTGATGCCTCATTGAGAACACAACTGGCAAACGGTAATGGATCGTTGATTGGAGTTCATCCGCACGGGACGCTAAATAATGTATTAACTGTACGCACACCTGAACAGTACAATGCGGTAGGCGACGGAATAGCTGACGATACTTCAAAATTAAAAGAAATGCTTTCAGACATAAACAACGTTCCTGAAACACTTCCTGATGCTGCGGCTGTAAACTCGTACATGGAGCAAGTAGCAGTAAAAATTAACCTGACCAAGTTATACCGTTTCACAGAGACGCTATACATACCTCCAGGTGTTTCAATTGAAATGCCTGCACCAAACTTTTTTACTCGTGAGTGTAAGCAAGGATTGTTTTATGACCCAGTAGATAAGAATACAGCAGCAATCAGCTTAATGGTGTACCGTAAACAGCCTGATGGTTCATACAAACTCAATAAAGATGTAGATTATTATCCTACTGGGTTAGATATTGATAATGGGGACGCTATAACATGTGCCAGAAAAATTGATATTAGTAACCTTAACCTGATTACAGCACCAGGTGTAAAGGTTGGTGTTAAATGGATAGGTGGGGCAGGTTGCACTACAAAAGGGTTATCCATTGGGGAGAATACAGGGAGCGATATTACAACAGCAAGACTGCCAAGAGTAGGATTGTTGCAGTCAGCATCATGGGGTTCTGTTCATGAAAATCTACGTATCCTGTATAAAACTCAGGGCGCAGTGTTCATTGACTCTAATGGCGGTGCTGCTGTAAACAATGCTTACATTTCTCGCCTTGGTAATACTAATGGTGAGTTGGAACAAGCAGTGTATAAACCCGAAGGATTTACTGAGGTAGGCGATGTTGCTATCACACAGTTTGCAGGTTCCGAGGTTAAGTTTAACAACCCAATCATCGAACAAGCATCTTTCGACTTTGTTCACGCTGGTCGAGATACTGATTCCTATGGTTTATTTATGGTTGATAAACCCCATATTGAGTCATCTGGCGGGAAGAAAAAACATAGTTTCTATCTTATCAATACCAGTTCGGATGTTACGTTGTCAGGAGTGGGTCTTTCAGGACAAGACCCTGATCTAGATAGTATGTACTTCCTTAAAAACTGCCCAGAAACTGCCAGAAATGTTGTCAGGGGACAAATGCCAGTAGGTGGTGTAAAACTCGTTAGGGGTACTGGTAATTACCCTACATTGGTACTCGACTGTACAAACATGGGAAGCCAATTTCAATTTGGGGAAGTTGGTGACATTTTCTACATCAAAGATGTTGTTGGCGTAAAAGCAGACACTCTATACATAGATCCTGTAAATGGTAATAACTACAACTGGGGATTTAACGGAACCAAACCTATAAGAGAGCTACTTAATATTTCAAAGTTATGCCAGCTATTCAAGTGCAAAAGCGTTTATCTTAATCCAGGTGAGATAGCCATTACCTCTAACACAGAGTTGCCGATGGTTAATTTTGAAGGTACTGGTAGCTTGAAAGCAAATTCTGGTAGTAGCTTCCTTATCAAAACCGGTGGGACATTATCATTAATTGGGCTTGCTGGTATATCTACAGATGGCGGCCATATGTTTAGAGTCTCCACCAGGGAAAAAGTAAACATACATACTAACTGCCCAGTGGATTCTGGTGCGGCCTATGTTGTTCTAAGTGAGGTTCAAGGTAATATTGAATACAGGCAATTGTTTTATTCTGTAAATTGTTCTAAGTATGTAGGTGCAACTGCGAGTCAAACTGTCGCTGGTGTCATGGTTAAGACCGCAACAAGACCGACAGGAATCGATGCTGCTCCAGTTGATGGTAATGTTTCTCTATCCTATAAAATTATAGAATCATAA

Tertiary structure

PDB ID
78bd6ccf0aded6cd54d5e461f8acf1752f92498157cb91fe2cb43370c10d1802
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7106
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Salmonella bacteriophage diversity and host specificity revealed by physiological characterization and whole genome sequencing Fong,K., Tremblay,D., Delaquis,P., Moineau,S., Goodridge,L., Levesque,R. and Wang,S. 2019-09-14 — GenBank