Protein

View in Explore
Genbank accession
XNS39348.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,75
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSSGGGKAKTPTLINDNLYHKQFYRVLDIISEGPIYGPVNTKAPLNSVMLNDTPVTDANGNTSIPGVSVAWRNGTLDQSPINGFSAIESTVIVNAQVKHDTPIIRTVSDPNVTRVRLNIGVDSLVQSDEQSNQHNTSVMMMIDVKPSSSSTWTLVKDVTIGPGKISGEYLEAHIINAPDEKPFDIRVRRVTADSTSDLLRNDTRWSSYSEIIDDNLSYPHTAVAGAVIDHDQYTDTPTRTYHLRGLIVDVPDNYDPETRTYSGLWLGGLKQAYTNNPAWIFRYLVKNERFGLARHAGYIDVDDGALYTLSQYCDQLVDDGYGGLEPRMTLNAYITEQMSARDLLDNIAGMFRGIALWDGQRLTVMIDAPQDPIATITNANVVDGAFTRSSIARAECYNAVIVSWTDPENGWEQSKEYVADDELIARDGYNETTLEAFGCTSRGQAYRAGKWLIETAKREPSKFTFKMARDAIHFTPGDIIEILDNNRAGARLGGRIVANNGKVITVDKVDAKYIAAGDTISLLDSDGKFKKHQITGVSGNKITLAAAPSWIRNGTVFAVSTEVAKPVLCRITSVAETENNSVYTIEAAQHDPNKQAIVDEGAIFEVNNDTLNHFRVPNIENLKVVNIGSETIQCRATWETQTTTHRMTFEIRIYNADGAVVKSYETTKYSYDFYGIDAGVYSLGVRGRNDTGMKGAESIVDLVIGAPAAPVGVNWVPGVFQATVYPISKTTLTTDTAYEFYYAGENQITDPAKITTAAQFTGRGYQWTFGGMNTGHTYYVYVRTRNAFGVSDFVEASGQPTENFDEISDYVTKDVLNSDQFKEMVSDIKDLGDRADIIESATEDLKTATDDLKTATDNLKTDTDALKKDTEDLYKKVEENADEIGKHEVRIDSLEVSSENVDNELAQTKASLQNASLALINNSLAQTNTRVTLTAQYKKGRGETKAQIDRIDNVIADEKQATAEALETITAEMNTMDSNIKGEIARVDKAIANETQARTEAISNVNASISTLEGSTTASVNRLDQAIADESAARAQAISGVNASISTLDSKVTSNITRIDKAIADETQARTEAISGVNASISTLDSKVTSNVTRIDKAIADETKARTDAISSLNSSLTSTINSKVSEVSTALSTHETSSAEKFSQISASFEAVNSSITEWSQTMTTADEALSTKIDQLTVTVNGNTTAIETTSKALTDFKGNVDASWSIKIATDNNGKKYATGMSLGLTGSGTNVQSQCIFLVDRFVLMTAANGTYQTPFYVTNGAMYVREAFIKDASIGTAKIADAAITTAKIAQQIQSTNYKAGSAGWMINKNGSAELNNVTVRGAVYANSGKFKGSLEATSFVGDVASTNFIPQASFPNQSGSASRSVTKTYTDSSSSSLSKTVFVMIPYHLTYYQYSQSTSIKVTIDINGNKKTYSVVRAASTPQFGFTVSHCVAGITAQKVTIKITEEYTNTSTGAERRAGLALVTRSSGSWA
Physico‐chemical
properties
protein length:1478 AA
molecular weight: 160344,32150 Da
isoelectric point:5,06068
aromaticity:0,07375
hydropathy:-0,32727

Domains

Domains [InterPro]
IPR053171
Unmapped
1–1350
IPR053171
DC_0129
STR
9–940
DC_0129 DC_2097 IPR015406
IPR055385
ATT
88–214
IPR055385 IPR032876 IPR055383 IPR057587 Coil DC_1904
XNS39348.1
1 1478
Architecture
STR
ATT
STR
ATT
STR
ATT
STR
STR
RBD
STR 9-87 | ATT 88-214 | STR 215-334 | ATT 335-496 | STR 497-708 | ATT 709-811 | STR 812-940 | STR 968-1096 | RBD 1097-1476 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNS39348.1
1 1478
Domain Start End Length (AA) Confidence
N-terminal 1 494 494 0,7286
Central domain 495 1293 800 0,0815
C-terminal 1294 1478 184 0,7548
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-494
Central
495-1293
C-terminal
1294-1478

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage MagusPhagus
[NCBI] 		3233703 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNS39348.1 [NCBI]
Genbank nucleotide accession
PP925836.1 [NCBI]
CDS location
range 13169 -> 17605
strand -
CDS
ATGAGTAGCGGCGGCGGCAAAGCAAAAACACCAACATTGATAAATGACAACCTGTATCATAAACAGTTTTATCGTGTACTGGATATTATTTCAGAAGGTCCGATTTATGGACCTGTGAATACGAAAGCGCCATTAAACAGCGTTATGCTTAATGACACCCCTGTAACTGACGCGAACGGCAATACCAGTATCCCTGGCGTTAGCGTGGCGTGGCGCAATGGTACTCTAGATCAATCACCTATTAACGGTTTTAGCGCCATCGAATCAACCGTTATTGTTAACGCTCAGGTGAAACACGATACTCCAATAATCAGGACTGTATCAGATCCTAACGTTACGCGCGTGCGCCTGAATATCGGCGTCGATTCACTTGTACAATCTGACGAGCAAAGCAATCAACATAATACATCTGTCATGATGATGATTGACGTGAAGCCTTCGTCTTCTTCTACGTGGACGCTTGTTAAAGACGTCACTATAGGTCCGGGTAAGATCAGCGGAGAATATCTTGAAGCGCATATTATCAACGCGCCGGATGAAAAACCGTTTGATATTCGCGTTCGCCGCGTAACGGCTGATAGCACAAGCGATCTATTGCGAAATGATACGCGATGGAGTAGCTACAGCGAAATAATCGACGATAATTTATCTTATCCTCACACCGCTGTAGCAGGCGCGGTAATTGACCACGACCAGTACACCGACACGCCTACACGCACTTATCACCTGCGTGGTCTTATTGTCGACGTGCCTGATAACTACGACCCGGAAACGCGCACTTATTCCGGTTTATGGCTTGGCGGCTTGAAACAGGCTTACACTAATAACCCTGCGTGGATCTTCCGTTACCTGGTTAAAAACGAGCGTTTCGGCCTTGCCCGTCATGCTGGCTATATTGACGTTGATGACGGCGCACTGTATACGCTTTCTCAATACTGCGACCAGTTGGTTGATGATGGCTACGGCGGCCTTGAGCCTCGCATGACGCTTAACGCTTACATCACAGAGCAAATGAGCGCCCGCGACTTACTGGACAATATCGCCGGGATGTTCAGGGGTATCGCGTTATGGGACGGGCAACGCCTTACCGTGATGATTGATGCACCACAAGACCCGATCGCCACCATTACAAATGCAAATGTCGTTGATGGCGCGTTTACTCGTTCAAGTATCGCCCGCGCAGAATGCTACAACGCCGTGATTGTGTCATGGACAGACCCGGAAAACGGCTGGGAGCAATCCAAAGAGTATGTAGCAGATGATGAGCTAATCGCCCGTGATGGTTACAACGAAACCACGTTGGAGGCGTTCGGGTGCACGTCACGCGGGCAAGCGTACCGCGCGGGCAAATGGCTGATAGAAACAGCAAAACGCGAGCCGTCAAAATTCACGTTTAAAATGGCCCGTGACGCGATTCACTTTACGCCAGGGGATATCATCGAGATCCTCGATAATAACCGCGCTGGCGCTCGCTTAGGCGGTCGCATCGTTGCGAACAACGGCAAAGTAATAACTGTAGACAAGGTTGATGCTAAATATATTGCCGCTGGGGATACAATCAGCCTTCTTGATAGCGATGGCAAGTTTAAAAAACATCAGATCACCGGGGTGAGCGGAAACAAAATCACACTGGCGGCGGCCCCGTCATGGATTAGAAACGGCACTGTTTTTGCTGTATCGACTGAAGTGGCAAAACCCGTTTTGTGCCGGATCACCAGTGTAGCAGAAACAGAAAATAACAGCGTATACACTATCGAAGCCGCACAGCACGACCCTAACAAACAAGCGATAGTCGATGAAGGCGCAATCTTTGAGGTCAACAATGATACGCTTAATCATTTCCGCGTGCCGAACATTGAAAATCTGAAGGTGGTAAACATTGGATCGGAAACAATTCAATGCCGCGCCACATGGGAAACACAGACAACCACGCATCGTATGACATTTGAGATCCGCATATATAATGCAGATGGTGCGGTGGTTAAAAGCTATGAAACCACGAAATACAGTTATGATTTTTATGGCATTGACGCTGGCGTGTATTCTTTAGGGGTTCGCGGAAGAAATGATACTGGCATGAAGGGTGCCGAAAGTATCGTTGACCTTGTTATCGGTGCGCCAGCAGCGCCAGTAGGCGTTAACTGGGTTCCAGGTGTATTTCAGGCTACAGTGTACCCGATAAGCAAGACAACGCTAACAACTGATACAGCGTACGAATTCTACTATGCAGGGGAAAACCAGATCACAGATCCGGCAAAAATAACCACGGCGGCACAGTTTACCGGGCGCGGGTATCAGTGGACTTTCGGCGGCATGAATACGGGCCACACTTATTACGTTTATGTGCGCACACGTAATGCTTTTGGTGTTTCTGACTTCGTAGAAGCATCAGGACAGCCAACAGAAAACTTCGATGAAATCAGCGATTATGTCACTAAAGACGTGCTGAATTCAGACCAGTTCAAGGAAATGGTAAGCGACATTAAGGATCTTGGCGACCGCGCAGACATTATCGAAAGTGCAACTGAAGACCTTAAAACAGCTACAGACGACCTTAAAACAGCTACAGACAACCTTAAAACAGACACAGACGCGCTTAAAAAAGACACTGAAGACCTTTATAAAAAAGTCGAAGAAAACGCCGATGAAATAGGCAAACATGAGGTAAGAATAGACTCATTAGAGGTATCAAGCGAAAACGTCGATAACGAACTGGCACAGACAAAAGCAAGCCTACAAAACGCATCGCTTGCGCTCATCAATAATTCGCTTGCTCAAACTAATACGCGCGTCACTCTTACCGCTCAATACAAGAAAGGGCGCGGTGAGACTAAAGCGCAAATCGACCGTATAGACAATGTTATTGCTGACGAAAAACAGGCAACAGCAGAAGCGCTTGAAACTATCACCGCAGAGATGAACACGATGGACTCAAACATCAAAGGCGAGATAGCGCGAGTAGACAAAGCTATTGCAAACGAAACACAGGCAAGAACTGAAGCCATTAGCAATGTTAACGCCAGCATAAGCACATTGGAAGGCAGCACAACAGCCAGCGTTAATCGTCTTGATCAGGCAATAGCTGACGAGTCCGCCGCGCGTGCTCAAGCAATTAGCGGAGTGAACGCCAGCATCAGCACGCTTGATTCTAAAGTAACAAGCAACATTACGCGTATAGATAAAGCAATTGCTGACGAAACGCAGGCAAGAACGGAAGCAATAAGCGGAGTGAATGCAAGCATCAGCACGCTTGATAGCAAGGTTACAAGCAATGTGACCCGTATCGACAAAGCTATTGCAGATGAGACAAAGGCCCGCACAGATGCAATAAGTAGTCTTAACTCATCGCTTACCAGTACGATTAATTCGAAAGTATCTGAAGTGTCAACAGCACTTTCTACGCATGAAACATCAAGCGCGGAAAAATTCAGCCAGATCTCAGCGTCTTTCGAAGCTGTAAACTCAAGCATCACGGAATGGTCGCAGACCATGACAACTGCGGACGAGGCATTATCAACCAAAATTGATCAGCTTACAGTAACAGTTAACGGGAACACCACGGCGATCGAGACGACATCGAAAGCGTTAACTGACTTCAAAGGTAACGTTGATGCGTCATGGTCAATCAAGATTGCCACCGACAACAACGGCAAAAAATACGCAACAGGCATGTCTCTTGGCCTGACTGGTAGCGGGACTAACGTTCAATCGCAGTGTATTTTCCTTGTTGACCGCTTCGTGTTAATGACCGCCGCAAACGGCACATATCAAACGCCTTTCTATGTCACCAATGGTGCAATGTATGTGCGCGAAGCGTTTATTAAAGACGCATCAATAGGGACAGCTAAAATTGCAGATGCAGCAATCACTACAGCTAAAATTGCACAGCAAATACAGTCAACCAACTATAAAGCCGGTTCGGCTGGCTGGATGATTAATAAAAACGGTAGCGCGGAGCTTAACAACGTAACGGTAAGGGGGGCGGTGTATGCAAATAGCGGTAAATTTAAAGGGTCGCTAGAGGCTACAAGTTTTGTAGGCGATGTCGCGTCAACTAACTTTATACCTCAAGCATCATTCCCTAACCAGTCGGGCAGTGCATCGCGTTCTGTTACTAAAACTTATACAGATTCGTCTTCGAGTTCGCTTTCTAAAACCGTTTTTGTGATGATTCCTTATCACCTGACTTACTATCAATATTCTCAATCAACATCCATAAAAGTAACAATTGATATTAATGGCAATAAGAAAACATATTCAGTAGTAAGGGCTGCATCAACGCCTCAATTCGGATTTACGGTATCCCATTGTGTCGCAGGGATCACGGCGCAAAAAGTGACTATAAAAATAACGGAAGAATACACTAACACCAGCACAGGCGCAGAAAGAAGGGCGGGTCTTGCGCTTGTTACGAGAAGCTCAGGATCATGGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0fdf1f9746d211adf759b567a3fa325ab59ee1149c27c278251380f895896be9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6685
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50