Phage RBP Database

Genbank accession

QVW27275.1 [GenBank]

Protein name

long-tail fiber protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,69

TSP

Evidence RBPdetect2

Probability 0,62

Seq2Symm

C3 confidence 0,999

C3	0,999
D3	0,002
C1	0,001

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MADLKLGTTLGGAGIWSASNLPLLPSGDRLTYKGWRVYTENDRPTAEDINALSTINGGTVAKNTTFNQSVTVGINLTANTLYSKSYVDITTGGAAPGILFKRSDLTGTPSSEQGIMQLTGLNASGVTLATLNINARADGGNRIYLNAYKNGTTNTSFVVDSANQLVSVEKGSFRVAGSSTFAAVSATTLNVSGAITANTVTPTDWTNHDNRYITGIPRSMQGNSFGAAVVTEKNDVLSVGGNVIDGPYGNTTYSGQVSTYRRTLNSGVSLVQTYYDTNSSWIRSGSGSPGAWSWSAGDANGWRRIYDTATPPTPAEVGAVNKAGDTMSGVLTLAPISQPLKTQGGGVFAYDGNVYINKVGFSGWIDDLFFKNTGGVVTGTIDQDWLNQNVYCTSALSHTATGSKNYLRRFRGGNGDQIWHETVQGGTYRLATGDTDSANLLTIESSGNMFLNGSQGGSSNLFLDADSNSVVWYRMLNGAEKAVTFASNDGVYHIRTNNVRSNTWDFRAGMILNLGICSGTDYALIRGTPDGGGWDQWRERSSGLQIDMPNGATSAYNIWKATVWGATHVAAMDVHIPNNDGNQSRVRLIHQSNQYVYFDASGQVTVSGNGNFNDVYIRSDERLKSNLSKIESALDKVDLLEGVIYDKAEHIGGEPTTREAGLVAQQLQKVLPEAVTIGEDTKGNEILGVSSSAVVALLVNAIKELREEIRELKSR

Physico‐chemical properties

protein length:	715 AA
molecular weight:	76341,55550 Da
isoelectric point:	5,62691
aromaticity:	0,08252
hydropathy:	-0,29580

Domain architecture

QVW27275.1

1 715 aa

CHP 619–715

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR030392
CHP

IPR030392 Coil

IPR030392
CHP

IPR030392

QVW27275.1

1715 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0643
STR

DC_0643

QVW27275.1

1715 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR030392	CHP	DC_0088	619	676	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
IPR030392	CHP	DC_0088	619	715	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
Coil	Unmapped	-	695	715	Coils	Coil	-	-	-	-

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

QVW27275.1

1 715 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	326	326	0,1656
Central domain	327	525	200	0,2416
C-terminal	526	715	189	0,9510

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Cronobacter phage JC03 [NCBI] · taxon 2831170

Uroviricota Caudoviricetes Pantevenvirales Straboviridae Pseudotevenvirus Pseudotevenvirus gap161

Host

Cronobacter sakazakii [NCBI] · taxon 28141

Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Cronobacter Cronobacter sakazakii

No CDS data available.

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)