Protein

View in Explore
Genbank accession
QVW27275.1 [GenBank]
Protein name
long-tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,69
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MADLKLGTTLGGAGIWSASNLPLLPSGDRLTYKGWRVYTENDRPTAEDINALSTINGGTVAKNTTFNQSVTVGINLTANTLYSKSYVDITTGGAAPGILFKRSDLTGTPSSEQGIMQLTGLNASGVTLATLNINARADGGNRIYLNAYKNGTTNTSFVVDSANQLVSVEKGSFRVAGSSTFAAVSATTLNVSGAITANTVTPTDWTNHDNRYITGIPRSMQGNSFGAAVVTEKNDVLSVGGNVIDGPYGNTTYSGQVSTYRRTLNSGVSLVQTYYDTNSSWIRSGSGSPGAWSWSAGDANGWRRIYDTATPPTPAEVGAVNKAGDTMSGVLTLAPISQPLKTQGGGVFAYDGNVYINKVGFSGWIDDLFFKNTGGVVTGTIDQDWLNQNVYCTSALSHTATGSKNYLRRFRGGNGDQIWHETVQGGTYRLATGDTDSANLLTIESSGNMFLNGSQGGSSNLFLDADSNSVVWYRMLNGAEKAVTFASNDGVYHIRTNNVRSNTWDFRAGMILNLGICSGTDYALIRGTPDGGGWDQWRERSSGLQIDMPNGATSAYNIWKATVWGATHVAAMDVHIPNNDGNQSRVRLIHQSNQYVYFDASGQVTVSGNGNFNDVYIRSDERLKSNLSKIESALDKVDLLEGVIYDKAEHIGGEPTTREAGLVAQQLQKVLPEAVTIGEDTKGNEILGVSSSAVVALLVNAIKELREEIRELKSR
Physico‐chemical
properties
protein length:715 AA
molecular weight: 76341,55550 Da
isoelectric point:5,62691
aromaticity:0,08252
hydropathy:-0,29580

Domains

Domains [InterPro]
IPR030392
619–676
IPR030392 Coil
IPR030392
619–715
IPR030392
QVW27275.1
1 715
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage JC03
[NCBI] 		2831170 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVW27275.1 [NCBI]
Genbank nucleotide accession
MW767161.1 [NCBI]
CDS location
range 32189 -> 34336
strand -
CDS
ATGGCTGATTTGAAATTAGGCACAACGCTGGGTGGTGCGGGTATCTGGAGTGCGTCAAACCTCCCTCTGTTGCCCTCTGGCGACAGATTGACGTATAAAGGGTGGAGAGTATACACCGAAAACGATCGTCCAACAGCGGAGGATATAAACGCCCTCTCGACGATCAACGGCGGTACTGTTGCGAAGAACACCACGTTCAACCAAAGCGTGACCGTAGGTATTAACTTAACAGCGAACACGCTGTATTCAAAAAGTTATGTCGATATCACCACGGGCGGGGCTGCTCCGGGTATATTGTTCAAACGTTCTGACTTGACCGGAACTCCGTCAAGTGAACAGGGCATTATGCAACTTACAGGACTTAATGCTTCCGGCGTTACGTTGGCAACTCTGAATATTAACGCCCGTGCTGACGGTGGCAACAGGATCTATTTGAACGCATACAAAAACGGAACAACAAATACTTCCTTTGTTGTTGATTCTGCGAATCAACTGGTATCCGTTGAAAAAGGTTCTTTCCGTGTAGCAGGATCATCGACCTTCGCTGCGGTGAGCGCAACCACGTTAAACGTAAGCGGGGCAATTACTGCTAATACGGTAACTCCTACTGATTGGACAAACCACGATAACCGTTATATCACGGGTATTCCTCGCAGTATGCAGGGAAACAGTTTTGGTGCTGCTGTTGTAACCGAAAAGAACGATGTTCTGTCAGTTGGTGGTAACGTGATCGATGGGCCTTATGGTAACACTACATATTCTGGTCAGGTTTCGACATATCGACGCACGTTGAATAGTGGTGTATCATTGGTTCAAACTTACTATGACACAAATTCATCATGGATTCGAAGCGGTTCTGGTTCTCCTGGTGCTTGGTCATGGAGTGCTGGTGATGCTAACGGTTGGCGACGGATTTACGACACGGCTACTCCACCAACTCCGGCAGAAGTAGGGGCAGTAAACAAAGCTGGAGATACCATGAGTGGTGTTTTGACCCTGGCACCTATTTCTCAACCGCTTAAAACGCAAGGCGGTGGTGTTTTTGCGTATGACGGAAACGTGTATATCAATAAAGTAGGATTTTCTGGATGGATTGATGATTTGTTCTTTAAAAATACAGGAGGTGTTGTAACAGGGACAATCGACCAGGACTGGTTGAATCAGAACGTATATTGCACGTCGGCATTGAGCCACACTGCAACAGGTTCGAAGAATTATCTTCGTCGTTTCCGTGGTGGTAATGGCGACCAGATCTGGCATGAAACTGTTCAGGGCGGCACGTATCGTTTAGCAACAGGTGATACAGACTCTGCAAATTTACTTACTATTGAAAGTTCTGGCAACATGTTTCTTAACGGTTCTCAAGGTGGTTCATCAAACCTATTCCTTGATGCTGACAGTAACAGTGTAGTTTGGTATCGTATGCTTAATGGCGCGGAAAAGGCAGTAACCTTTGCAAGTAATGACGGTGTATACCATATTCGTACAAACAATGTCCGTTCGAATACATGGGATTTCCGAGCGGGGATGATTCTGAACCTGGGCATTTGTTCTGGTACTGATTATGCATTGATTCGCGGAACTCCTGATGGTGGTGGATGGGATCAGTGGCGTGAACGTTCCTCTGGTTTACAGATCGATATGCCTAACGGTGCTACCTCAGCATATAACATCTGGAAAGCTACCGTATGGGGCGCAACCCATGTTGCCGCAATGGATGTCCATATTCCCAATAACGATGGCAATCAATCCCGTGTTCGACTGATTCACCAAAGTAACCAATATGTATATTTCGATGCAAGTGGTCAAGTAACCGTATCCGGTAATGGTAACTTTAACGATGTTTATATTCGTTCTGATGAAAGACTGAAAAGTAATCTCAGTAAGATCGAATCTGCATTGGATAAAGTCGATTTGTTGGAAGGTGTTATTTACGATAAAGCTGAACATATCGGTGGTGAACCTACTACCCGTGAAGCTGGTTTGGTTGCACAACAACTGCAAAAAGTATTACCGGAAGCAGTTACCATAGGCGAAGATACAAAAGGAAATGAAATTCTGGGAGTTTCATCTTCTGCTGTTGTTGCTTTGCTGGTCAACGCGATCAAAGAACTCCGTGAGGAAATCAGGGAACTTAAATCCCGCTAA

Tertiary structure

PDB ID
df6a65fbf35eafe99d0ed26342b147c7862371d1b3418447eb11b6590ff367bf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5890
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome analysis of a novel phage JC03 infecting Cronobacter sakazakii Jiang,J., Zhao,C., Li,Z. and Xu,C. 2024-11-20 — GenBank